AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean16g01345 ATGAAAATAAATAATAAAGAAAGTTTGGTGGGGAAGCCGCAGCGTGCACTTTGCGGTGTGCACCAGGACAGACATTCCGATTATTCTTCACCGATATCTATACATACACACATACATATATCTCATTCTCTCTCTCTACTCCAGTCGAGATCATCAATGGCGAAACTCAAATGCAGATGCAATGTGTTCTTCGCAATCTTCTTCTTCTTCACAGTTGTTCTATTCACATACGCTTCATCACTAAAGGAAGGACAAACGTGTGTAGATAACGGTAACTGTGACTTAGGGTTACATTGTGAAGCGTGTGTTGCAGACGGCAATGTTCGCCCTAGGTGTACTCGTATTCAGCCTTTGAGTCCGTTTTCCAAGGTGAAAGGATTGCCGTTCAATCGGTACTCGTGGTTAACGACGCATAATTCGTTCGCGAAATTTGGAGAGAAATCGGCTACCGGTTCCGTTGTTCTAGCTCCGACGAATCAGCAGGATTCTGTTAGCTCTCAGCTCGATAATGGTGTGAGAGGACTGATGCTTGATATGTATGACTTTGAGAATGACATTTGGTTATGTCATTCCTTTGGTGGCAAATGCTTCAACTACACGGCTTTTCAACCTGCTATCAATGTTCTGAAAGAGATCCGGGTTTTCCTAGAAAAGAATCCAACCGAGATCATAACCATAATCATTGAAGATTATGTTACGTCACCAAACGGTCTAACTAATGTCTTCAATGCTGCTGGTCTGAGGAAATACTGGTTTCCAGTAGCCCAAATGCCAAGTGATGGTAGGGACTGGCCCACAATTGACTCCATGGTCCGCCAAAATCACCGTTTGGTAGTTTTCACTTCCAAATCTTCTAAACAGGCGACTGAAGGGATTGCTTATGAGTGGAAGTACTTGGTTGAAAACCAATACGGAACAGTCGGGATGAAAAGTGGTTTATGTCCTAACCGTGCTGAGTCAGCAGCAATGAACACTACATCAAGATCACTGGTTTTAATGAACTATTTCCCAGATACCCCTGATCTTACCCAAGCTTGCAAGCACAATTCAGACCCGTTAATGAACATGATAAACACATGCCATGATGTAGCTGTTAAACGTTGGCCTAATTTCATTGCTGTTGACTTTTACAAGAGAAGCAATGGTGGGGGTGCACCTGCTGCTGTAGATATGGCTAACGGGCAGCTGGTTTGTGGTTGTAACACCATTGCAGCATGCCGGCCAAACATGACCATTGGAGCCTGTAACTACCCAGAGGCTGGAGCTGCTCCAACTCCAACTACAACTTCAGCAATAAAAAGCTCCGGGAACATGGATGCTCAACCGGGTCAACTTTTATGGTTGTTTAGGTCGGGTTTGATAGCTATAACCTTGTGTTTTTAA 1383 43.89 MKINNKESLVGKPQRALCGVHQDRHSDYSSPISIHTHIHISHSLSLLQSRSSMAKLKCRCNVFFAIFFFFTVVLFTYASSLKEGQTCVDNGNCDLGLHCEACVADGNVRPRCTRIQPLSPFSKVKGLPFNRYSWLTTHNSFAKFGEKSATGSVVLAPTNQQDSVSSQLDNGVRGLMLDMYDFENDIWLCHSFGGKCFNYTAFQPAINVLKEIRVFLEKNPTEIITIIIEDYVTSPNGLTNVFNAAGLRKYWFPVAQMPSDGRDWPTIDSMVRQNHRLVVFTSKSSKQATEGIAYEWKYLVENQYGTVGMKSGLCPNRAESAAMNTTSRSLVLMNYFPDTPDLTQACKHNSDPLMNMINTCHDVAVKRWPNFIAVDFYKRSNGGGAPAAVDMANGQLVCGCNTIAACRPNMTIGACNYPEAGAAPTPTTTSAIKSSGNMDAQPGQLLWLFRSGLIAITLCF 460
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean16g01345 460 PANTHER UNCHARACTERIZED 92 406 IPR051057 GO:0008081(PANTHER)
Hean16g01345 460 SUPERFAMILY PLC-like phosphodiesterases 126 397 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Hean16g01345 460 CDD PI-PLCc-At5g67130-like 119 393 - -
Hean16g01345 460 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 128 236 - -
Hean16g01345 460 Gene3D Phosphatidylinositol (PI) phosphodiesterase 119 385 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean16g01345 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
100775 Hean10g02429 Hean16g01345
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr16:52249461 Hean7g01636 Hean-Chr7:107502118 dispersed
Hean Hean-Chr10:134258933 Hean16g01345 Hean-Chr16:52249461 wgd