Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean16g01349 | ATGCACTGTGAGCCGTTTGACTTTGACCCAACAGTGGTGACGGGGCAGTCATGGAACACATCAGTTCTCGAAAGCAAAACCCCAGTACTAGTTGAGTTCTATGCCAGCTGGTGTGGACCATGCCAAATGGTGCACCGTGTGATCGATGAGATTGCAGCCGAATATGCAGGGAAGGTGAACTGTTACGTGCTAAACGCTGACAAGGACCCACGAATCACAGAGGAATACGACATCAAAGCGGTCCCAATAGTGGTTTTGTTCAAGAACGGTGAGAAGTGTGAGTCAGTGGTTGGGACCATGCCTAAAGAGTTCTATGTGGCTGCCATTGAAAGGGTCTTGTCGTCTTCGTCTTGA | 354 | 49.44 | MHCEPFDFDPTVVTGQSWNTSVLESKTPVLVEFYASWCGPCQMVHRVIDEIAAEYAGKVNCYVLNADKDPRITEEYDIKAVPIVVLFKNGEKCESVVGTMPKEFYVAAIERVLSSSS | 117 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean16g01349 | 117 | PIRSF | Thioredoxin | 9 | 113 | IPR005746 | GO:0015035(InterPro) | |
| Hean16g01349 | 117 | CDD | TRX-family | 21 | 110 | - | - | |
| Hean16g01349 | 117 | SUPERFAMILY | Thioredoxin-like | 5 | 114 | IPR036249 | - | |
| Hean16g01349 | 117 | PANTHER | GEO12009P1 | 9 | 113 | - | GO:0005737(PANTHER)|GO:0015035(PANTHER) | |
| Hean16g01349 | 117 | Gene3D | Glutaredoxin | 11 | 116 | - | - | |
| Hean16g01349 | 117 | ProSiteProfiles | Thioredoxin domain profile. | 1 | 114 | IPR013766 | - | |
| Hean16g01349 | 117 | FunFam | Thioredoxin | 7 | 116 | - | - | |
| Hean16g01349 | 117 | Pfam | Thioredoxin | 12 | 109 | IPR013766 | - | |
| Hean16g01349 | 117 | PRINTS | Thioredoxin family signature | 37 | 46 | - | - | |
| Hean16g01349 | 117 | PRINTS | Thioredoxin family signature | 29 | 37 | - | - | |
| Hean16g01349 | 117 | PRINTS | Thioredoxin family signature | 77 | 88 | - | - | |
| Hean16g01349 | 117 | ProSitePatterns | Thioredoxin family active site. | 30 | 48 | IPR017937 | - | |
| Hean16g01349 | 117 | NCBIfam | thioredoxin | 14 | 111 | IPR005746 | GO:0015035(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean16g01349 | K03671 | thioredoxin |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr16:52324535 | Hean3g02417 | Hean-Chr3:129704330 | dispersed | |
| Hean | Hean-Chr11:140548550 | Hean16g01349 | Hean-Chr16:52324535 | transposed | |
| Hean | Hean-Chr16:52324535 | Hean16g02497 | Hean-Chr16:128066755 | wgd |