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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean16g01355 ATGGCCAACTTCAAACAACAACAACAACAACCTCCGACTCTCTCCAAACAACGTTCATGGTCACCCGACATCAACCGCGACATTGAGTGGCAGAAGCTCAAGAACAACCAACGACGTCGTTTCCGTCACCGCCGTAGTCAGAGCATAGGCGTTGATATTAAAGTTGATGTTACTGATGAAGATGTGAAGGAACTGAAAGCGTGCTTTGATTTGGGTTTTGGGTTTGATCTTTCTGCTGATTTGGATCCGAAACTTGCCTCGGCTTTTCCTGCTCTTGAGTTTTATGCTGCGGTTAATCGTCGTTATAATGGCGGGATGCTGTCGAGATCTTCTTCGCTAAGTTCTGATTCGTCGTTGAGCTCGTTGGGTTCTACCACTGCTGCCATCGTCGATCTAGGTGATGATCCGAAGAAGGTGAAGATGAAATTGAAACAATGGGCGCAACTGGTGTCTTGCTCAGTTCTAGAAGCTTCTTCTCAGTCAGTGAATAACAAAAATGTTGCAGAATAG 510 45.69 MANFKQQQQQPPTLSKQRSWSPDINRDIEWQKLKNNQRRRFRHRRSQSIGVDIKVDVTDEDVKELKACFDLGFGFDLSADLDPKLASAFPALEFYAAVNRRYNGGMLSRSSSLSSDSSLSSLGSTTAAIVDLGDDPKKVKMKLKQWAQLVSCSVLEASSQSVNNKNVAE 169
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean16g01355 169 MobiDBLite consensus disorder prediction 1 21 - -
Hean16g01355 169 PANTHER OSJNBA0071G03.3 PROTEIN 8 155 - -
Hean16g01355 169 Pfam Protein of unknown function (DUF1685) 57 116 IPR012881 -
Hean16g01355 169 MobiDBLite consensus disorder prediction 1 22 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean16g01355 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
102766 Hean16g01355 Hean3g01583
404149 Hean16g01355 Hean4g04557
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr14:136538703 Hean16g01355 Hean-Chr16:52528883 dispersed
Hean Hean-Chr16:52528883 Hean3g01583 Hean-Chr3:95152072 dispersed
Hean Hean-Chr16:52528883 Hean4g04557 Hean-Chr4:207187762 wgd