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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean16g01396 ATGGTTTCCATTTGTGCTTCTTTGCATCTTCACATGGATATACAACTCATGCTACCCTCACCGGCGACCACCACCACCACCCCCTACACCACCGCACCTTCCACTCCTCACCACTACCCCAATTACTACTACAGCGCCCCAACCAGCCCAATCCACACCACCTTTCACCACGACAACAACGATAACGATAACGACTACGATGACGACGACGACGATTTCGCATTCGATTTCAGTGGACAGCTAGAACCACCGTCTATCTCCGCAGCCGACGAGCTCTTTCACTGCGGTCAAATCAAAACATCAAACCCCCTCTTAACCCATCACCATAACCCCCCAACATTTTCCAAAAAAAGCTCCAATTCTTTCACTGCGGCATTTCATCAAACACCTGGTGAGCAACAAACCCAACCCCCTCAAAACCCACGTGAAACAACGTCCCCTTTCAGAATTTCCGATATTCTATCCGAACAAGATAAGTTAGATACCAACAACAATCAGAAATATTCTCTGACATGGTACAATAGATGGAACCTGAAGAACCTGTTACTGTTTAGAAGCACATCAGAGGGTAGTGCGAGAAGGAGGAAAGAGCCGGTGAATAGATACGCGAGAGTAACGAAAGGGGATGAGGATGTGAAGAATTCGAGCTTTCGAAGCACGGAGAGTTGTGGGTCGAGTCGGAGAATGGTAAGAAGGGTGTCGGCCCATGAGATACATTATACGGCGAACCGGGCGGTGGCGGAGGAGATGCGGCGGAAGACTTACTTGCCGTATAAGTCCGGGTTGTTAGGGTGTTTGGGGTTTCGTAATAACATCGGTGTCGGTACCACCAGTAGTGGTCATACGTTAAATATATACTAG 861 48.43 MVSICASLHLHMDIQLMLPSPATTTTTPYTTAPSTPHHYPNYYYSAPTSPIHTTFHHDNNDNDNDYDDDDDDFAFDFSGQLEPPSISAADELFHCGQIKTSNPLLTHHHNPPTFSKKSSNSFTAAFHQTPGEQQTQPPQNPRETTSPFRISDILSEQDKLDTNNNQKYSLTWYNRWNLKNLLLFRSTSEGSARRRKEPVNRYARVTKGDEDVKNSSFRSTESCGSSRRMVRRVSAHEIHYTANRAVAEEMRRKTYLPYKSGLLGCLGFRNNIGVGTTSSGHTLNIY 286
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean16g01396 286 MobiDBLite consensus disorder prediction 54 80 - -
Hean16g01396 286 MobiDBLite consensus disorder prediction 127 146 - -
Hean16g01396 286 PANTHER OS07G0619500 PROTEIN 30 270 - -
Hean16g01396 286 Pfam Protein of unknown function (DUF1645) 89 257 IPR012442 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean16g01396 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
404156 Hean16g01396 Hean4g04541
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr16:54261914 Hean3g01204 Hean-Chr3:72925962 dispersed
Hean Hean-Chr10:106482102 Hean16g01396 Hean-Chr16:54261914 transposed
Hean Hean-Chr3:112684788 Hean16g01396 Hean-Chr16:54261914 transposed
Hean Hean-Chr16:54261914 Hean4g04541 Hean-Chr4:207043770 wgd