AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean17g04533 ATGTGCGGAATCGCCCTAATCATCTCCGGTGTTCGTGTCGATTTATCGCATATTCTTCCAGATGCAACCGATTATTATTATTATTCACCTCATTCTCAACAATCGGAAACTACATTGTTTTCTGTAGATGATATCAAGGCAGCTCTGAGGAAAAGAGGCCCTGATAGTTTAGGAAGCAAGTCTATATCACTTCATGTTCATGATGGAAGGATTATTCGATCTTCGGTGGAGGAAGAAGAACCAACTATATTATCCAAATCAAACGTTGATATTGATTTGAATAATGGTTTAGTTGGAAATTTTTTATTTGTTGGTGCTACATTGCAATTAAGAGGAGTACATCCAATCACACAACCTTTGGTGGACAAATCTGGGAATATTCTTGTCTATAATGGTGAAGTGTTTGGAGGAATTGAGATCGTTAACGATAGCAATGATGCTGAAGTTCTCATTGAGTCCTTAAGTAAATGCTGCAACTGCCTTTCTTGTCAACATGACGCTGCATGTTCTCCTGGGAAGTACTCTGTTCCTGAATTTCTTTCGAAAATCAAGGGGCCTTGGGCTTTAATCTACTGGCAGGAGAGCTCAAAGACAATATGGTTTGGTAGAGATGCACTTGGAAGGCGAAGTCTTCTAATTCATCGGCCAAATATAAAAGACTCCCGACTCATGCTTTCTTCTGTATCACCACCTTACGCTCTTCATGCCGATTTTGGATCTGAAAATGGACCCGGTGAACCAAGCTTTTGGGAAGAGCTTCCATGTGGAGTTTACAGCTTGTCCATGAATGCTTCAAAAATGAATGGAAATTGGGTGTGTGAAGTTAAAAGACATGATTGGCTTGATCCGTTGCTGCAAGAACTGATTAAGTGGGATAGATCTCTCGTGGAACCCACACCTGATGTTTTAAGTGATGTTTATAAAACGTGTTCTAATGAGCAAGAGCAACGGGCGAAATTGCATCAGGAAGTTCTCTCTGCGCTTAAAGAATCTGTGAGACGACGCACAATATTTTCAGGAGTCCACCAGGGCAATTCTCCAGTGGCTGTACTTTTTTCTGGTGGCTTAGATTCGATGATTCTTGCAGCATTGCTGGATCAGTGCTTAGATCCAAAATATGAAATTGATTTGTTGAATGTGAGTTTTGATGGTCAGTTAGCTCCTGACAGAATCTCTGCTAGGGCAGGTGTGAACGAGCTTAGAAAAATTGCCCCCTTGAGAAGATGGAATCTGGTAGAGATAGATGCAGAATTGTCAAAATTGACTCCGGAGACACCACATGTCATGTCGCTTATCAATCCCTCGAATACATACATGGACCTTAATATTGGAATCGCCTTGTGGTTGGCAGCTGGCGGTGATGGGTGGGTGAGTGAAGAAATTGGGACGGATAGTAATAACCATTCAGAATGCCAGCGTATTAAGTACAAGTCTGAATCCAGAATTTTGTTGGTCGGTTCTGGTGCAGATGAGCAATGTGCTGGTTACGGCCGCCATAAAACTAAGTACAAAAAAAGCAGTTGGGCTGGGCTAAATGAAGAAATGAAATTAGATATGCAGAGAATATGGAAGAGGAACCTAGGTAGAGATGATAGATGCATTGCTGATAATGGCAAAGAGGCAAGATTTCCTTTTCTAGATGAGGATGTAATAAGGATACTGCTCGATATTCCACTATGGGAAATTGCTGACCTTCGCCAACCAAGTGGAGTTGGTGATAAAAAAATATTGCGTGAGGTTGCAAGAATGCTTCACTTGCAAGAAGCAGCTGTTCTACCTAAAAGAGCTATACAGTTCGGTTCTAGAATCGCTAGGGAATCAAACCGCAAGAATTTTGGAAGTAACCGGGCTGCAAATCAAGCTTCTGCTGGAAGTGCACTCTTTAACCCGCTCTGA 1896 41.77 MCGIALIISGVRVDLSHILPDATDYYYYSPHSQQSETTLFSVDDIKAALRKRGPDSLGSKSISLHVHDGRIIRSSVEEEEPTILSKSNVDIDLNNGLVGNFLFVGATLQLRGVHPITQPLVDKSGNILVYNGEVFGGIEIVNDSNDAEVLIESLSKCCNCLSCQHDAACSPGKYSVPEFLSKIKGPWALIYWQESSKTIWFGRDALGRRSLLIHRPNIKDSRLMLSSVSPPYALHADFGSENGPGEPSFWEELPCGVYSLSMNASKMNGNWVCEVKRHDWLDPLLQELIKWDRSLVEPTPDVLSDVYKTCSNEQEQRAKLHQEVLSALKESVRRRTIFSGVHQGNSPVAVLFSGGLDSMILAALLDQCLDPKYEIDLLNVSFDGQLAPDRISARAGVNELRKIAPLRRWNLVEIDAELSKLTPETPHVMSLINPSNTYMDLNIGIALWLAAGGDGWVSEEIGTDSNNHSECQRIKYKSESRILLVGSGADEQCAGYGRHKTKYKKSSWAGLNEEMKLDMQRIWKRNLGRDDRCIADNGKEARFPFLDEDVIRILLDIPLWEIADLRQPSGVGDKKILREVARMLHLQEAAVLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSALFNPL 631
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean17g04533 631 Pfam Asparagine synthase 505 584 IPR001962 GO:0004066(InterPro)|GO:0006529(InterPro)
Hean17g04533 631 Pfam Asparagine synthase 324 395 IPR001962 GO:0004066(InterPro)|GO:0006529(InterPro)
Hean17g04533 631 Gene3D HUPs 307 626 IPR014729 -
Hean17g04533 631 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 253 IPR017932 -
Hean17g04533 631 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 45 249 IPR029055 -
Hean17g04533 631 PANTHER ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 1 629 IPR051857 -
Hean17g04533 631 CDD Asn-Synthase-B-C 326 600 IPR001962 GO:0004066(InterPro)|GO:0006529(InterPro)
Hean17g04533 631 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 28 248 IPR029055 -
Hean17g04533 631 Pfam Glutamine amidotransferase domain 117 227 IPR017932 -
Hean17g04533 631 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 319 629 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean17g04533 K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr15:13052587 Hean17g04533 Hean-Chr17:194288596 dispersed