Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean17g04539 | ATGTGTGACAAGTGGGGCGTGGAGCCTGGGGGGTTTTACGAGCCTTATTACATCAAGGGAGAAGAATATCGAATACACATGTGTTTTGGTCTAGGCTGGGATCCGAAAACACCACCAGTTCCACAGCAACTTATTTCATTGGCTGCCAAAGCAGTCAAAGACGCTCAACCCCATCTGGATCAACTTCCTTCAATGTCCCCAAATACTTGTTTAGTCTGTTTCTATCCACTTTCCTGTGGTCGTATTGGTCTTCATCAGGATCGCCGCGACGAGAGTGGAAGACAATCATCCCCTGTGGTTTCCATCTTCATTGGTGAGGCTGCAGAATTTGTGTATCGCCTTTGTGGAGATAACAACAAGTTACGAAGTGTTTTGATGAAGTCTGGTGATGTATTGATATATGGTGGCAGGTCCAGACATATTTATCATGGTGTCACACAGAACATGCCTTTATTGTTATTACAAGAAACAGGGATTAAAGCAGGTTGTCTAAACCTTACTTTAACGCAGTTTTGA | 516 | 43.8 | MCDKWGVEPGGFYEPYYIKGEEYRIHMCFGLGWDPKTPPVPQQLISLAAKAVKDAQPHLDQLPSMSPNTCLVCFYPLSCGRIGLHQDRRDESGRQSSPVVSIFIGEAAEFVYRLCGDNNKLRSVLMKSGDVLIYGGRSRHIYHGVTQNMPLLLLQETGIKAGCLNLTLTQF | 171 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean17g04539 | 171 | ProSiteProfiles | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 66 | 171 | IPR005123 | - | |
| Hean17g04539 | 171 | Pfam | 2OG-Fe(II) oxygenase superfamily | 36 | 151 | IPR027450 | - | |
| Hean17g04539 | 171 | Gene3D | - | 1 | 171 | IPR037151 | - | |
| Hean17g04539 | 171 | PANTHER | ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED | 2 | 150 | IPR004574 | GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0008198(PANTHER)|GO:0035513(PANTHER)|GO:0035515(PANTHER)|GO:0035516(PANTHER)|GO:0035552(PANTHER) | |
| Hean17g04539 | 171 | SUPERFAMILY | Clavaminate synthase-like | 33 | 147 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean17g04539 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr17:194402481 | Hean9g03787 | Hean-Chr9:169413916 | dispersed | |
| Hean | Hean-Chr17:194395363 | Hean17g04539 | Hean-Chr17:194402481 | tandem |