Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean17g04541 | ATGATTGTTGTTGAAGGGTCTGGTCTTGTAAGAAGGATTGGTCTTGCTGGTAAACTGATTGGGCATGAAGATTGGGTAAACACGATCGAGTTCAACCGCTGTGGTGATTGCCTGGTGTCGGGTTCTGATGACCGGCGAGTCATGTTGTGGAATGTGGCAAGTAAAGCTTTGGTCCTTTCGTATGATTCGGGTCATGCTAGAAATGTATTACAGGCTCGGATTATGCCATTTATTAATGACACGGTTATAGTAACTTCCGGTGGTGATGGTCAGGTGAGACTTGGTCAAGTAACAGATAACGGTAACCTTCAAACAATAGAATTAGGGAAGCACAATGGGCACGTTCACAAGCTTGCTGTTGAGCCTGGAAGTCCCCACATGTTTTACAGCTGTGGCGAGGACGGATTCGTTCAACGTGTAAGTTAA | 426 | 45.54 | MIVVEGSGLVRRIGLAGKLIGHEDWVNTIEFNRCGDCLVSGSDDRRVMLWNVASKALVLSYDSGHARNVLQARIMPFINDTVIVTSGGDGQVRLGQVTDNGNLQTIELGKHNGHVHKLAVEPGSPHMFYSCGEDGFVQRVS | 141 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean17g04541 | 141 | SMART | WD40-4 | 99 | 141 | IPR001680 | GO:0005515(InterPro) | |
| Hean17g04541 | 141 | SMART | WD40-4 | 12 | 51 | IPR001680 | GO:0005515(InterPro) | |
| Hean17g04541 | 141 | SMART | WD40-4 | 54 | 96 | IPR001680 | GO:0005515(InterPro) | |
| Hean17g04541 | 141 | Gene3D | - | 9 | 141 | IPR015943 | GO:0005515(InterPro) | |
| Hean17g04541 | 141 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 19 | 54 | - | - | |
| Hean17g04541 | 141 | SUPERFAMILY | WD40 repeat-like | 14 | 137 | IPR036322 | GO:0005515(InterPro) | |
| Hean17g04541 | 141 | PANTHER | WD REPEAT DOMAIN-CONTAINING FAMILY | 7 | 139 | IPR045151 | GO:0005737(PANTHER)|GO:0080008(PANTHER) | |
| Hean17g04541 | 141 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 38 | 52 | IPR019775 | - | |
| Hean17g04541 | 141 | Pfam | WD domain, G-beta repeat | 18 | 51 | IPR001680 | GO:0005515(InterPro) | |
| Hean17g04541 | 141 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 19 | 60 | IPR001680 | GO:0005515(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean17g04541 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr17:194427055 | Hean2g02486 | Hean-Chr2:149591923 | dispersed | |
| Hean | Hean-Chr17:194317074 | Hean17g04541 | Hean-Chr17:194427055 | proximal | |
| Hean | Hean-Chr17:194427055 | Hean17g04547 | Hean-Chr17:194646171 | proximal |