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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean17g04547 ATGTTGTATGGTGTGTTGTACATTGTTGATATAAATTCTAAACATTTAATCATTAGCAAGTATATTGTTATTTGTATGATTGTTGTTGAAGGGTCTGGTCTTGTAAGAAGGATTGGTCTTGCTGGTAAACTGATTGGGCATGAAGATTGGGTAAACACGATCGAGTTCAACCGCTGTGGTGATCGCCTGGTGTCGGGTTCTGATGACATGTTGTGGAATGTGGCAAGTAAAGCTTTGGTCCTTTCGGGTCATGCTAGAAATGTATTGCAGGCTCGGATTATGCCTTTTACTAATGACACATTGACACGGCTATAG 315 40.32 MLYGVLYIVDINSKHLIISKYIVICMIVVEGSGLVRRIGLAGKLIGHEDWVNTIEFNRCGDRLVSGSDDMLWNVASKALVLSGHARNVLQARIMPFTNDTLTRL 104
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean17g04547 104 Gene3D - 5 102 IPR015943 GO:0005515(InterPro)
Hean17g04547 104 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 32 100 IPR045151 GO:0005737(PANTHER)|GO:0080008(PANTHER)
Hean17g04547 104 SUPERFAMILY WD40 repeat-like 43 95 IPR036322 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean17g04547 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr17:194646171 Hean2g02486 Hean-Chr2:149591923 dispersed
Hean Hean-Chr17:194427055 Hean17g04547 Hean-Chr17:194646171 proximal