AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean17g04557 ATGCCCAAAACCATCCAATCTTTACAAGAAAACAAGAAACCATTCCATCGAAGGAATGGTTCAGGCGAGATTCATATTTTTGAATCTGCTCGTAACTTTGAAAGCAGTACTGACGCCACCCTCGCTCATAAAAGCTATATGAGAGAGGGTGGTGGAAGACTGAGTCTTGATATCCCTAATGGAAGATTGAGTCTTGATATCCCTAACACTAGACGAAACTCGATTCCTTTACAAGCCATGTTGATGGAGAACCGAAAGTCGGTTCCCTTACAAAGCATGATAATGGATCAAAATCCTATGATGATCAAGAATAATGACAAGAAGCATAAACAACCAAGCTCACCAGGAGGAAAGTTGGCTCATTTCTTGAACTCACTTTTCAACCAAACATCTTCTAAGAAATCAAAGTCCAAATCAAAGTCAACCACACCAACATATTCTATGAAAGATGAAGATGAGAGCCCAAGTGGATGGAGAAGAAAAAGAAGGAGTAGCATTAGCCTTTTCAGAAGTGGAAATAGTAATTCCACCACTAATGCAAGTGACACAAAATCTTTTAACTCAAGAACACTTCTACAACCACCCATAAAGAGCACACCTTATAAAGATCTTAGAACACATTCAGACCAAAAGCCTGCATGTGAAATTACCAGAATACCCATCAATGAAAACCACAACAAGAATGAAAACCTAATGATCAAAAGTGTGTTGCCTGAGCAAAAAAGAAGTTCTGGAAATGGGTTATTGGAGAAAGTTAGGGTTTGTGATGTAATTCACAATGATGATCATCAGAAACATGATCCAAAGGTGGAGATTAAAGAACTCAAAAGTTTCATTCTTGATGATGATGATGGTGGAGATAGTGATTCAAGTTCTGATCTTTTTGAGTTAACAAACTGTGATTTGGGTTACTATTCTTCAAGTGGTTTGCCAGTTTTTGAAACAACACATATGGATAGCATCAAGAGGGGTGCACCAATCTCTAGCTAG 990 38.18 MPKTIQSLQENKKPFHRRNGSGEIHIFESARNFESSTDATLAHKSYMREGGGRLSLDIPNGRLSLDIPNTRRNSIPLQAMLMENRKSVPLQSMIMDQNPMMIKNNDKKHKQPSSPGGKLAHFLNSLFNQTSSKKSKSKSKSTTPTYSMKDEDESPSGWRRKRRSSISLFRSGNSNSTTNASDTKSFNSRTLLQPPIKSTPYKDLRTHSDQKPACEITRIPINENHNKNENLMIKSVLPEQKRSSGNGLLEKVRVCDVIHNDDHQKHDPKVEIKELKSFILDDDDGGDSDSSSDLFELTNCDLGYYSSSGLPVFETTHMDSIKRGAPISS 329
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean17g04557 329 MobiDBLite consensus disorder prediction 1 21 - -
Hean17g04557 329 MobiDBLite consensus disorder prediction 128 150 - -
Hean17g04557 329 MobiDBLite consensus disorder prediction 167 195 - -
Hean17g04557 329 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 37 322 IPR039621 GO:0009734(InterPro)
Hean17g04557 329 MobiDBLite consensus disorder prediction 128 208 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean17g04557 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr12:23168267 Hean17g04557 Hean-Chr17:194833476 dispersed
Hean Hean-Chr17:194833476 Hean8g00427 Hean-Chr8:7494468 transposed