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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00008 ATGACCCTTTTTACGGGTAGCTCGAAAATAGTAGATAAGTTGGCTTATGACCTGAACGGACGAATTAAAGTAGAAGATGCAGGATTCGACTGGAAAATCCTCAGGCCTGATGTTCACAAGGTGGATTATGTGTCATGGGTGTGTGATCAAGATGCATATGCATCTATTGGCCAAAAATGCCTAACACAATCGTTGTTATTCGTTCATGAGAACTGGAAAAACAGCTCACTCATGAGTCACCTAAACCACCTTGCGGGGAGAAGGACGCTTGATAATTTAACAATTGGGTCAGTTCTTAGAGTAAGTTATTAA 312 41.03 MTLFTGSSKIVDKLAYDLNGRIKVEDAGFDWKILRPDVHKVDYVSWVCDQDAYASIGQKCLTQSLLFVHENWKNSSLMSHLNHLAGRRTLDNLTIGSVLRVSY 103
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00008 103 SUPERFAMILY ALDH-like 3 89 IPR016161 GO:0016491(InterPro)
Hean1g00008 103 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 1 99 IPR044638 GO:0003842(PANTHER)|GO:0004029(InterPro)|GO:0005739(PANTHER)|GO:0010133(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00008 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3228926 Hean Hean1g00008 Hean-Chr1:341976 Hean1g00324 Hean-Chr1:8706541
3269425 Hean Hean1g00008 Hean-Chr1:341976 Hean9g04074 Hean-Chr9:176002733
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hean17g01544 . 175 235 Aldehyde Dehydrogenase gene family AT5G62530 58.73 1.53e-21 84.7
Hean16g00705 . 1 538 Aldehyde Dehydrogenase gene family AT3G48000 79.298 0.0 897.0
Hean15g03778 . 37 209 Aldehyde Dehydrogenase gene family AT1G74920 52.874 6.11e-52 172.0
Hean15g04456 . 167 243 Aldehyde Dehydrogenase gene family AT1G23800 81.818 3.52e-43 145.0
Hean14g02879 . 26 534 Aldehyde Dehydrogenase gene family AT1G23800 80.469 0.0 875.0
Hean14g02880 . 26 534 Aldehyde Dehydrogenase gene family AT1G23800 79.297 0.0 863.0
Hean14g02881 . 273 516 Aldehyde Dehydrogenase gene family AT3G48000 60.656 5.71e-94 284.0
Hean14g02882 . 310 479 Aldehyde Dehydrogenase gene family AT1G23800 75.882 2.52e-92 277.0
Hean14g02883 . 282 530 Aldehyde Dehydrogenase gene family AT1G23800 73.092 2.52e-131 380.0
Hean14g02884 . 269 528 Aldehyde Dehydrogenase gene family AT1G23800 78.846 5.16e-150 427.0
Hean14g02886 . 274 534 Aldehyde Dehydrogenase gene family AT1G23800 72.797 5.49e-135 388.0
Hean14g02887 . 26 534 Aldehyde Dehydrogenase gene family AT1G23800 79.764 0.0 860.0
Hean14g02889 . 273 516 Aldehyde Dehydrogenase gene family AT3G48000 71.721 3.13e-118 356.0
Hean14g03158 ACH,WGDA 1 483 Aldehyde Dehydrogenase gene family AT4G36250 56.315 0.0 581.0
Hean13g01140 . 1 545 Aldehyde Dehydrogenase gene family AT3G66658 80.917 0.0 936.0
Hean13g01912 . 175 234 Aldehyde Dehydrogenase gene family AT5G62530 61.29 1.29e-20 83.6
Hean13g01914 . 175 234 Aldehyde Dehydrogenase gene family AT5G62530 61.29 7.59e-21 83.6
Hean13g03636 . 17 525 Aldehyde Dehydrogenase gene family AT1G79440 76.031 0.0 803.0
Hean12g00176 . 16 501 Aldehyde Dehydrogenase gene family AT3G24503 66.049 0.0 683.0
Hean12g01657 . 55 107 Aldehyde Dehydrogenase gene family AT1G74920 67.925 2.92e-18 74.3
Hean12g01882 . 204 317 Aldehyde Dehydrogenase gene family AT1G79440 79.825 3.57e-47 160.0
Hean12g02705 . 37 209 Aldehyde Dehydrogenase gene family AT1G74920 52.299 1.97e-51 171.0
Hean12g03000 . 252 316 Aldehyde Dehydrogenase gene family AT1G79440 80.0 8.67e-29 104.0
Hean12g03546 . 454 516 Aldehyde Dehydrogenase gene family AT1G79440 76.19 3.23e-27 103.0
Hean12g03547 . 369 461 Aldehyde Dehydrogenase gene family AT1G79440 59.14 4.40e-36 126.0
Hean11g00464 . 8 484 Aldehyde Dehydrogenase gene family AT4G36250 62.055 0.0 633.0
Hean11g01553 . 36 525 Aldehyde Dehydrogenase gene family AT1G79440 74.082 0.0 754.0
Hean11g01554 . 34 525 Aldehyde Dehydrogenase gene family AT1G79440 73.984 0.0 756.0
Hean11g01555 . 422 517 Aldehyde Dehydrogenase gene family AT1G79440 77.083 6.61e-50 164.0
Hean11g01556 . 34 525 Aldehyde Dehydrogenase gene family AT1G79440 73.984 0.0 756.0
Hean11g02291 . 192 263 Aldehyde Dehydrogenase gene family AT1G79440 80.556 1.03e-22 95.9
Hean10g02169 . 19 106 Aldehyde Dehydrogenase gene family AT1G74920 56.522 3.85e-24 94.0
Hean10g02189 . 84 607 Aldehyde Dehydrogenase gene family AT2G14170 68.821 0.0 761.0
Hean10g02563 . 41 199 Aldehyde Dehydrogenase gene family AT3G48170 68.75 3.92e-73 228.0
Hean10g03913 . 7 501 Aldehyde Dehydrogenase gene family AT3G24503 66.667 0.0 702.0
Hean9g04074 ACH 25 556 Aldehyde Dehydrogenase gene family AT5G62530 78.008 0.0 903.0
Hean9g04144 . 1 501 Aldehyde Dehydrogenase gene family AT1G74920 79.042 0.0 861.0
Hean9g04169 . 1 538 Aldehyde Dehydrogenase gene family AT3G48000 78.85 0.0 889.0
Hean9g04170 . 1 538 Aldehyde Dehydrogenase gene family AT3G48000 74.907 0.0 856.0
Hean7g00912 . 175 232 Aldehyde Dehydrogenase gene family AT5G62530 61.667 3.51e-21 83.2
Hean7g02231 ACH,WGDA 1 483 Aldehyde Dehydrogenase gene family AT4G36250 55.901 0.0 583.0
Hean6g02875 . 33 525 Aldehyde Dehydrogenase gene family AT1G79440 74.037 0.0 754.0
Hean6g02881 . 34 525 Aldehyde Dehydrogenase gene family AT1G79440 67.073 0.0 657.0
Hean5g01255 . 1 501 Aldehyde Dehydrogenase gene family AT3G24503 68.064 0.0 712.0
Hean5g02217 . 3 484 Aldehyde Dehydrogenase gene family AT1G44170 65.975 0.0 674.0
Hean5g02623 . 424 464 Aldehyde Dehydrogenase gene family AT1G74920 58.537 9.88e-09 48.1
Hean5g03090 . 24 85 Aldehyde Dehydrogenase gene family AT1G74920 61.538 8.90e-18 73.9
Hean5g03091 . 1 502 Aldehyde Dehydrogenase gene family AT3G48170 78.088 0.0 843.0
Hean4g04006 . 188 344 Aldehyde Dehydrogenase gene family AT1G79440 58.599 2.63e-55 179.0
Hean4g04608 . 75 606 Aldehyde Dehydrogenase gene family AT2G14170 82.09 0.0 900.0
Hean3g00566 . 1 496 Aldehyde Dehydrogenase gene family AT2G24270 89.113 0.0 929.0
Hean3g03284 . 1 496 Aldehyde Dehydrogenase gene family AT2G24270 84.708 0.0 890.0
Hean2g00622 . 393 501 Aldehyde Dehydrogenase gene family AT3G24503 60.55 3.13e-44 148.0
Hean2g00623 . 87 345 Aldehyde Dehydrogenase gene family AT3G24503 70.27 4.51e-130 376.0
Hean2g00939 . 252 325 Aldehyde Dehydrogenase gene family AT1G79440 75.676 1.54e-32 117.0
Hean2g01420 ACH 29 556 Aldehyde Dehydrogenase gene family AT5G62530 82.765 0.0 942.0
Hean2g03054 ACH 4 483 Aldehyde Dehydrogenase gene family AT4G36250 54.792 0.0 568.0
Hean1g00008 . 277 375 Aldehyde Dehydrogenase gene family AT5G62530 67.677 1.49e-45 152.0
Hean1g00324 . 250 375 Aldehyde Dehydrogenase gene family AT5G62530 71.429 3.10e-62 199.0
Hean1g00377 . 204 317 Aldehyde Dehydrogenase gene family AT1G79440 79.825 3.82e-47 160.0