AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00032 ATGCCCAAAAAAGAGGTCACGAACAAATTACCCCCAAAATTCGTAAAACACACCCACTCCATCTTCTTTACCTCACACTCTCTCTTTCATGGCGTAAACCTTACTGCTACCTGCAACCTCATTCTTTCTCAACATGAAACCATAGTGTGTGTAACTCTGTATCCTGCTGCTGTACAATTCTCAATCATCATGAGTCGAAATTCATCCAAACACTCATTCATCGGTCGAAATGTTCACACTAACGGTATTCACAATGCTCCGGTCACCGGATTATTATCTCACCGGAGAGTCATGAGTTTAACAAACACAGAGGATTTCAGCAGCACCGTAGATCTTTTCTCGCGTAATCGCCGTACTCTCTCCGTCGCCGATGAATCCGACTTTGAGGTGAGATTGGAACGCCTTTCGGCTGGAACAACAAAACCTGCGAAAAGTGTGTTAGATGATCTGCTTTCGTCTAATGAAGGGGGAAAGCATGACTATGACTGGCTATTGACTCCACCCGAAACACCTTCAGTTACTTCTTCAAATGGAAAAGAATATCAACCAAAATCAGTTGCTCCAAGAAGAAATGGTTCAGCTAGATCAGGCTCTACAAATAGAACCTCAAGGCTTTCTGCTTCTCAATCTGAGAGTAACCATCTTTCAAGACCAGCAAGAAGCAGTTCAGTAACTCGCTCATCGATCTCAACCACCCAAAACACAAACAGAAACTCTAATATTCTTAACACCAGCTCTGCTTCCGTCTCTTCTTACCACACAAACAGAAACTCTAATATTCTTAACACCAGCTCTGCTTCCGTCTCTTCTTACATAAGATCATCCACCCCAACTAACCGCTCACCATCAGCCACCAGACCCTCCACCCGTACAACTCCGTCCAGAAGCCCCCCATCCTTCACCACCACTTCCATCGATAGAACCATTAGACCATCAACTCCTACTCCTCGTCCCCAATCACCTACAGTCCGGCCAGCTTCTAGACCATCAACTCCAACGCGTAGGAACCCAAAACCTTCCAATTCTGTTTCTCCATCTCTTAACAACCGGAGTGTGGGACCCGCATCAAGGCCAAGCTCTCCTGTCTCACGTGTCCGGGCCCCGCCCCAGCCCATCAATCTTCCTGATTTTCCAAACGAAACACCACCAAATCTTAGAACAAGTTTGCCAGAAAGGCCTGTGTCTGCTGGTAGGTCCAGGCCAGGTGTAGCCTTAACTGTGAAGGGAAATGTAGAGAATACAAACACAAGGAGACCGTCATCGCCCATTGTTGCTAGGGGAAGGCTTGCAGAACCATCCGGACGGGGACGGTTGCATGCTAACGGGCATGTGGTTGAATCACCTACAAGAAAACCGACAAAGTTGTTGAATTCGGAGAGTGGTACCGGGTTTGGGAGAAGCATCTCAAAGAAATCACTTGACATGGCCATAAAACACATGGATATAAGAAGCGGAGGCACACGTCCACTTTCTGGATCAACGCTCTTTCCTCACAGCATTCGATCTAATCATGGTTCAAGTGCAAGCAACAATGTCAACTCCAAAAATGGAACTTTTAATAACGGTTTTTCAGATAACAGAGTGAAACCCGTGAGCGTAGAACATAAAAGTCCGTATTCTTCTAAACTAACACATGTAGACGTATACGAGAGCTTGAGGTACGACTCGATTTTACTAAAAGAAGACTTGAAGAACGCAAGTTGGTTGCACAGTGCAGATGAAAAGAGCGATCAAAGTCCGTTGTTTGATAATGGATTTGAGCCACTCCCTGAACCTTTTGCTCCCTTGTGA 1791 45.73 MPKKEVTNKLPPKFVKHTHSIFFTSHSLFHGVNLTATCNLILSQHETIVCVTLYPAAVQFSIIMSRNSSKHSFIGRNVHTNGIHNAPVTGLLSHRRVMSLTNTEDFSSTVDLFSRNRRTLSVADESDFEVRLERLSAGTTKPAKSVLDDLLSSNEGGKHDYDWLLTPPETPSVTSSNGKEYQPKSVAPRRNGSARSGSTNRTSRLSASQSESNHLSRPARSSSVTRSSISTTQNTNRNSNILNTSSASVSSYHTNRNSNILNTSSASVSSYIRSSTPTNRSPSATRPSTRTTPSRSPPSFTTTSIDRTIRPSTPTPRPQSPTVRPASRPSTPTRRNPKPSNSVSPSLNNRSVGPASRPSSPVSRVRAPPQPINLPDFPNETPPNLRTSLPERPVSAGRSRPGVALTVKGNVENTNTRRPSSPIVARGRLAEPSGRGRLHANGHVVESPTRKPTKLLNSESGTGFGRSISKKSLDMAIKHMDIRSGGTRPLSGSTLFPHSIRSNHGSSASNNVNSKNGTFNNGFSDNRVKPVSVEHKSPYSSKLTHVDVYESLRYDSILLKEDLKNASWLHSADEKSDQSPLFDNGFEPLPEPFAPL 596
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00032 596 PANTHER GASTRIC MUCIN-LIKE PROTEIN 99 579 - GO:0043622(PANTHER)|GO:0055028(PANTHER)
Hean1g00032 596 MobiDBLite consensus disorder prediction 189 243 - -
Hean1g00032 596 MobiDBLite consensus disorder prediction 160 243 - -
Hean1g00032 596 MobiDBLite consensus disorder prediction 168 182 - -
Hean1g00032 596 MobiDBLite consensus disorder prediction 271 400 - -
Hean1g00032 596 MobiDBLite consensus disorder prediction 433 463 - -
Hean1g00032 596 MobiDBLite consensus disorder prediction 271 313 - -
Hean1g00032 596 MobiDBLite consensus disorder prediction 574 596 - -
Hean1g00032 596 MobiDBLite consensus disorder prediction 326 358 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00032 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
100683 Hean10g00798 Hean1g00032
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3228942 Hean Hean1g00032 Hean-Chr1:1042503 Hean8g01448 Hean-Chr8:37373157
3280362 Hean Hean1g00032 Hean-Chr1:1042503 Hean10g00798 Hean-Chr10:32425647