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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00035 ATGGCTTCCGATTCACCCAAAAAAAACTGGTCAATCAACGATTTCGAGATCGGAAAACCGCTCGGCAAGGGCAAATTCGGCAGAGTTTATCTCGCTCGTGAAGCAAAGAGCAAGTATATAGTGGCTTTGAAGGTGATATTCAAAGAGCAGATTGAAAAGTACCGGCATCAACATCAGTTGAAGAGAGAAATGGCGATTCAAACTAGCCTTCGGCATCCGCATGTTTTGAGGCTGTACGGATGGTTTCATGATGCGGAACGGATATTTTTTATTTTGGAGTATGCTCATGGAGGGGAGTTGTATGGAGAGCTGAGGAGAGCTGGTTATTTGTCTGAGCAACAAGCTGCTACTTACATTGCCAGCCTTACGCATGCATTAGCATACTGTCATGAGAAGCATGTTATCCATCGGGATATCAAGCCGGAGAACTTGTTGCTTGATCACGAGGGTCGGTTGAAGATAGCGGATTTTGGGTGGTCTGTTCAGTCAAAAAACAAGAGACACACAATGTGTGGAACATTAGACTATCTAGCACCAGAGATGGTGGAAAATAAAGCTCATGATTATGCAGTCGATAATTGGACTTTAGGTGTTTTATGTTATGAGTTTCTATACGGTGTCCCCCCTTTCGAGGCAGACAGCCAAGCAGATACATTTCGAAGGATTATGAAGGTTGACCTCACCTTTCCTTCTACCCCTCATGTTTCTGCCGAAGCTAAAGATCTCATAATACAACTTTTAGTGAAAGACTCTGCAAAAAGGCTCCCCCTTGACAAGATTTTGAAGCATCCTTGGATCATCATGAATGCTGATCCCAATGGTACTTTCCCTAAATAG 837 43.49 MASDSPKKNWSINDFEIGKPLGKGKFGRVYLAREAKSKYIVALKVIFKEQIEKYRHQHQLKREMAIQTSLRHPHVLRLYGWFHDAERIFFILEYAHGGELYGELRRAGYLSEQQAATYIASLTHALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSKNKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGVLCYEFLYGVPPFEADSQADTFRRIMKVDLTFPSTPHVSAEAKDLIIQLLVKDSAKRLPLDKILKHPWIIMNADPNGTFPK 278
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00035 278 FunFam Aurora kinase A 7 98 - -
Hean1g00035 278 CDD STKc-Aurora 14 266 - -
Hean1g00035 278 Pfam Protein kinase domain 15 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hean1g00035 278 ProSitePatterns Serine-Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hean1g00035 278 Gene3D Phosphorylase Kinase; domain 1 3 97 - -
Hean1g00035 278 SMART serkin-6 15 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hean1g00035 278 Gene3D Transferase(Phosphotransferase) domain 1 98 275 - -
Hean1g00035 278 PANTHER SERINE-THREONINE-PROTEIN KINASE IAL-RELATED 5 274 IPR030616 GO:0004672(InterPro)|GO:0005876(PANTHER)|GO:0007052(PANTHER)|GO:0031616(PANTHER)|GO:0032133(PANTHER)|GO:0032465(PANTHER)|GO:0035174(PANTHER)|GO:0051233(PANTHER)
Hean1g00035 278 FunFam Serine-threonine-protein kinase ark1 7 276 - -
Hean1g00035 278 SUPERFAMILY Protein kinase-like (PK-like) 10 269 IPR011009 -
Hean1g00035 278 ProSiteProfiles Protein kinase domain profile. 15 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hean1g00035 278 PIRSF ILK 3 269 - -
Hean1g00035 278 ProSitePatterns Protein kinases ATP-binding region signature. 21 48 IPR017441 GO:0005524(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00035 K08850 aurora kinase, other [EC:2.7.11.1]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3205512 Hean Hean10g04049 Hean-Chr10:180698814 Hean1g00035 Hean-Chr1:1066222
3226143 Hean Hean17g00697 Hean-Chr17:14233444 Hean1g00035 Hean-Chr1:1066222
3228944 Hean Hean1g00035 Hean-Chr1:1066222 Hean4g02526 Hean-Chr4:141991671
3252989 Hean Hean1g00028 Hean-Chr1:1018072 Hean1g00035 Hean-Chr1:1066222
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hean17g00697 WGDA 3 278 CBL-interacting serine-threonine protein kinases family AT5G10930 35.842 9.38e-55 182.0
Hean17g01676 . 14 270 CBL-interacting serine-threonine protein kinases family AT2G26980 51.751 2.98e-92 284.0
Hean17g03355 . 15 466 CBL-interacting serine-threonine protein kinases family AT4G18700 74.779 0.0 699.0
Hean17g03746 . 13 447 CBL-interacting serine-threonine protein kinases family AT1G01140 74.253 0.0 691.0
Hean16g00774 . 2 297 CBL-interacting serine-threonine protein kinases family AT4G24400 40.717 8.50e-69 221.0
Hean16g01723 . 8 429 CBL-interacting serine-threonine protein kinases family AT5G01820 60.094 1.20e-169 481.0
Hean16g02311 . 13 272 CBL-interacting serine-threonine protein kinases family AT2G26980 42.279 5.73e-66 211.0
Hean16g02564 . 52 125 CBL-interacting serine-threonine protein kinases family AT1G48260 40.541 9.96e-07 46.2
Hean16g02980 . 3 425 CBL-interacting serine-threonine protein kinases family AT5G45820 65.924 0.0 607.0
Hean16g02981 . 15 466 CBL-interacting serine-threonine protein kinases family AT4G18700 75.664 0.0 705.0
Hean15g01175 . 14 270 CBL-interacting serine-threonine protein kinases family AT2G26980 51.751 1.78e-92 285.0
Hean15g02114 . 28 457 CBL-interacting serine-threonine protein kinases family AT1G30270 84.884 0.0 778.0
Hean15g03656 . 30 309 CBL-interacting serine-threonine protein kinases family AT1G30270 38.742 5.20e-67 217.0
Hean15g04265 . 1 450 CBL-interacting serine-threonine protein kinases family AT5G58380 57.301 0.0 531.0
Hean14g00995 . 28 460 CBL-interacting serine-threonine protein kinases family AT1G30270 71.198 0.0 645.0
Hean14g01021 . 14 343 CBL-interacting serine-threonine protein kinases family AT2G26980 58.182 4.16e-129 400.0
Hean14g04210 . 130 190 CBL-interacting serine-threonine protein kinases family AT5G01810 53.968 1.73e-11 57.0
Hean13g03562 . 13 272 CBL-interacting serine-threonine protein kinases family AT2G26980 41.176 9.65e-66 210.0
Hean13g04183 . 14 374 CBL-interacting serine-threonine protein kinases family AT4G14580 57.143 2.94e-151 434.0
Hean12g00554 . 89 157 CBL-interacting serine-threonine protein kinases family AT2G26980 41.429 1.37e-14 66.6
Hean12g00555 . 89 157 CBL-interacting serine-threonine protein kinases family AT2G26980 41.429 1.37e-14 66.6
Hean12g02634 . 109 185 CBL-interacting serine-threonine protein kinases family AT2G26980 76.623 7.05e-39 130.0
Hean12g02677 . 109 185 CBL-interacting serine-threonine protein kinases family AT2G26980 76.623 7.05e-39 130.0
Hean12g02995 . 8 280 CBL-interacting serine-threonine protein kinases family AT4G24400 45.07 4.83e-72 229.0
Hean12g03243 . 30 309 CBL-interacting serine-threonine protein kinases family AT1G30270 39.799 9.28e-67 216.0
Hean11g01803 . 13 272 CBL-interacting serine-threonine protein kinases family AT2G26980 41.544 9.96e-67 213.0
Hean11g02325 . 1 453 CBL-interacting serine-threonine protein kinases family AT5G58380 60.44 0.0 568.0
Hean11g02326 . 74 330 CBL-interacting serine-threonine protein kinases family AT2G30360 66.148 2.83e-123 356.0
Hean11g02449 . 26 58 CBL-interacting serine-threonine protein kinases family AT5G45810 54.545 6.46e-06 42.4
Hean11g02918 . 1 443 CBL-interacting serine-threonine protein kinases family AT5G58380 53.708 1.19e-170 484.0
Hean11g02922 . 10 428 CBL-interacting serine-threonine protein kinases family AT5G01820 59.859 1.77e-168 478.0
Hean11g03066 . 15 489 CBL-interacting serine-threonine protein kinases family AT4G18700 72.234 0.0 700.0
Hean11g03207 . 7 282 CBL-interacting serine-threonine protein kinases family AT2G25090 42.708 1.59e-64 213.0
Hean10g00071 . 8 326 CBL-interacting serine-threonine protein kinases family AT4G24400 39.339 1.24e-65 212.0
Hean10g01037 . 118 174 CBL-interacting serine-threonine protein kinases family AT5G57630 59.649 1.17e-18 75.9
Hean10g01482 . 6 262 CBL-interacting serine-threonine protein kinases family AT4G24400 50.195 1.00e-87 274.0
Hean10g01492 . 57 274 CBL-interacting serine-threonine protein kinases family AT2G26980 22.957 6.61e-08 53.9
Hean10g01994 . 13 272 CBL-interacting serine-threonine protein kinases family AT2G26980 43.015 1.45e-68 218.0
Hean10g02068 . 206 286 CBL-interacting serine-threonine protein kinases family AT5G25110 45.349 5.93e-18 78.2
Hean10g02802 . 52 87 CBL-interacting serine-threonine protein kinases family AT3G17510 55.556 1.77e-06 45.1
Hean10g03612 . 7 438 CBL-interacting serine-threonine protein kinases family AT4G30960 70.507 0.0 605.0
Hean9g00769 . 16 439 CBL-interacting serine-threonine protein kinases family AT4G30960 74.648 0.0 624.0
Hean9g01783 . 1 450 CBL-interacting serine-threonine protein kinases family AT5G58380 58.537 0.0 551.0
Hean9g03147 . 30 309 CBL-interacting serine-threonine protein kinases family AT1G30270 40.264 3.54e-69 223.0
Hean9g04469 . 38 470 CBL-interacting serine-threonine protein kinases family AT5G25110 68.736 0.0 638.0
Hean8g02357 . 1 422 CBL-interacting serine-threonine protein kinases family AT2G30360 60.329 0.0 520.0
Hean7g01299 . 12 286 CBL-interacting serine-threonine protein kinases family AT2G25090 31.522 7.53e-38 146.0
Hean7g02529 . 14 270 CBL-interacting serine-threonine protein kinases family AT2G26980 51.751 2.70e-92 285.0
Hean6g00394 . 8 282 CBL-interacting serine-threonine protein kinases family AT4G24400 43.509 5.98e-71 226.0
Hean6g01280 WGDA 3 278 CBL-interacting serine-threonine protein kinases family AT5G10930 35.125 4.15e-55 182.0
Hean6g01807 . 19 279 CBL-interacting serine-threonine protein kinases family AT2G30360 38.662 5.28e-54 190.0
Hean6g02320 . 1 445 CBL-interacting serine-threonine protein kinases family AT5G35410 71.812 0.0 671.0
Hean6g02546 . 52 277 CBL-interacting serine-threonine protein kinases family AT2G30360 66.957 6.77e-115 337.0
Hean6g02547 . 16 421 CBL-interacting serine-threonine protein kinases family AT2G30360 57.627 6.74e-161 459.0
Hean6g02684 . 54 122 CBL-interacting serine-threonine protein kinases family AT2G26980 39.13 3.81e-15 66.2
Hean6g02808 . 8 265 CBL-interacting serine-threonine protein kinases family AT4G24400 41.852 1.93e-63 206.0
Hean5g00953 . 16 441 CBL-interacting serine-threonine protein kinases family AT4G30960 73.832 0.0 615.0
Hean5g01337 . 2 273 CBL-interacting serine-threonine protein kinases family AT4G24400 40.283 6.36e-64 208.0
Hean5g02184 . 15 444 CBL-interacting serine-threonine protein kinases family AT3G17510 68.372 0.0 602.0
Hean5g03203 . 9 262 CBL-interacting serine-threonine protein kinases family AT4G24400 52.362 2.38e-93 289.0
Hean5g03715 . 8 265 CBL-interacting serine-threonine protein kinases family AT4G24400 41.758 5.42e-58 192.0
Hean4g00572 . 3 439 CBL-interacting serine-threonine protein kinases family AT5G10930 62.611 0.0 599.0
Hean4g01035 . 131 165 CBL-interacting serine-threonine protein kinases family AT3G17510 62.857 2.83e-10 53.5
Hean4g01814 . 10 452 CBL-interacting serine-threonine protein kinases family AT5G58380 67.342 0.0 619.0
Hean4g02526 . 12 277 CBL-interacting serine-threonine protein kinases family AT5G10930 38.351 2.52e-58 191.0
Hean4g02824 WGDA 27 275 CBL-interacting serine-threonine protein kinases family AT4G18700 25.263 3.10e-16 82.0
Hean4g02904 . 28 457 CBL-interacting serine-threonine protein kinases family AT1G30270 84.884 0.0 776.0
Hean4g03024 . 5 455 CBL-interacting serine-threonine protein kinases family AT4G18700 71.965 0.0 678.0
Hean4g03025 . 2 410 CBL-interacting serine-threonine protein kinases family AT5G45820 57.623 0.0 520.0
Hean4g04143 . 19 279 CBL-interacting serine-threonine protein kinases family AT2G30360 39.033 7.66e-54 189.0
Hean3g00580 . 16 438 CBL-interacting serine-threonine protein kinases family AT4G30960 75.529 0.0 635.0
Hean3g00677 . 110 144 CBL-interacting serine-threonine protein kinases family AT1G48260 60.0 2.23e-07 45.4
Hean3g01946 . 8 291 CBL-interacting serine-threonine protein kinases family AT4G24400 42.373 1.68e-66 214.0
Hean3g03279 . 1 442 CBL-interacting serine-threonine protein kinases family AT5G10930 62.78 0.0 578.0
Hean3g03858 . 30 326 CBL-interacting serine-threonine protein kinases family AT1G30270 38.585 1.25e-67 218.0
Hean2g01255 WGDA 11 259 CBL-interacting serine-threonine protein kinases family AT5G57630 27.687 2.14e-13 68.9
Hean2g01840 . 1 445 CBL-interacting serine-threonine protein kinases family AT4G24400 79.866 0.0 753.0
Hean2g03021 ACH 6 271 CBL-interacting serine-threonine protein kinases family AT5G35410 33.942 1.77e-44 159.0
Hean1g00002 . 1 418 CBL-interacting serine-threonine protein kinases family AT2G30360 58.636 1.25e-175 497.0
Hean1g00035 . 28 285 CBL-interacting serine-threonine protein kinases family AT1G30270 38.077 2.64e-62 202.0
Hean1g01556 . 1 422 CBL-interacting serine-threonine protein kinases family AT2G30360 61.176 0.0 525.0
Hean1g01560 . 1 453 CBL-interacting serine-threonine protein kinases family AT5G58380 63.297 0.0 583.0
Hean1g02581 ACH 18 277 CBL-interacting serine-threonine protein kinases family AT5G10930 33.457 9.09e-44 156.0
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Hean Pkinase 2.8e-73 CL0016 PK Aur