AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00042 ATGTCTTCCGTTGCTCCAATTCATCAATCTTATGTTGCTAGAAACACTCGTTGTTGTTTGAATCCTGCTAGACATGTTCCACACCTCCAGTTTCCCAACCTAACCCACAAAAAACTCGTCGATTTCACCGGTTTGTGTATCAGATCAAAGCCAGATTTGTTATCCACCCGGCATGCAGTTCCGGTTGTTCCCTGTGCTGGTGGCGATGGCGGTAGTTCAGGTGTCGGTCACGGCAGTGGCGGTGGAGGTGGCAGTGGCGGTAGCGACTGGAGCAGCGGCGGAAAATCCAATGACTCATCGTCGTTCGATAGTTTCGGCCCAATTGGGGCTTTTTTAAGCGGTTGGAGATCTAGGGTTGCAGCTGATCCACAATTCCCTTTCAAGGTGCTAATGGAAGAACTAGTTGGTGTGAGTGCAAATGTGTTGGGCGACATGGCGACTCGACCGAATTTCGGTCTAAACGAGCTAGATTTCGTGTTCTCGACGTTAGTCGTAGGATCAATCCTGAATTTCACCCTTATGTATTTACTAGCACCCACCATGACATCCGGATCAGCATCATTACCTTTCATATTCGCGAACTCGCCAGCTAGCCACATGTTTGAGCCGGGCGCGTACACACTGGCTAACCGGTTTGGAACATTTGTATACAAAGGAGCCCAGTTTGCAGCCGTGGGTTTCGCAGCTGGTTTAGTTGGAACCGCATTGTCAAACGGGTTGATCAAGATGAGAAAAAAGATGGACCCAAGTTTCGAGTCGCCAAACAAGGCCCCACCCACTGTTTTGAACGCGGTCACGTGGGCAATTCATATGGGTATAAGTAGTAATTTAAGGTACCAAAGTTTGAATGGGATCGAGTTCATGCTGGCAAAGGGGTTACCTCCGTTGTTGTTCAAAACCTCGGTGGTTGGTTTAAGGTTGGTGAACAATCTTCTTGGTGGGATGACATTTGTTATGCTTGCAAGGTTGACTGGATCGCAAAGTGCGGGTGGAGAAGAAGACAAGATTGGTGATGAAGAGAGTTCGGATGTGGAGAAGAAGTTACTTGTGAATGAAATTCATTCAAAGTGA 1071 47.81 MSSVAPIHQSYVARNTRCCLNPARHVPHLQFPNLTHKKLVDFTGLCIRSKPDLLSTRHAVPVVPCAGGDGGSSGVGHGSGGGGGSGGSDWSSGGKSNDSSSFDSFGPIGAFLSGWRSRVAADPQFPFKVLMEELVGVSANVLGDMATRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTMTSGSASLPFIFANSPASHMFEPGAYTLANRFGTFVYKGAQFAAVGFAAGLVGTALSNGLIKMRKKMDPSFESPNKAPPTVLNAVTWAIHMGISSNLRYQSLNGIEFMLAKGLPPLLFKTSVVGLRLVNNLLGGMTFVMLARLTGSQSAGGEEDKIGDEESSDVEKKLLVNEIHSK 356
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00042 356 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 67 329 - -
Hean1g00042 356 MobiDBLite consensus disorder prediction 71 99 - -
Hean1g00042 356 Pfam Protein RETICULATA-related 118 285 IPR021825 -
Hean1g00042 356 MobiDBLite consensus disorder prediction 85 99 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00042 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
402272 Hean11g02566 Hean1g00042
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3224378 Hean Hean16g03026 Hean-Chr16:150954325 Hean1g00042 Hean-Chr1:1365781
3228948 Hean Hean1g00042 Hean-Chr1:1365781 Hean7g01618 Hean-Chr7:106959742
3275465 Hean Hean6g02528 Hean-Chr6:82165830 Hean1g00042 Hean-Chr1:1365781
3278605 Hean Hean9g03663 Hean-Chr9:165988484 Hean1g00042 Hean-Chr1:1365781
3280479 Hean Hean1g00042 Hean-Chr1:1365781 Hean11g02566 Hean-Chr11:114034058