AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00043 ATGCATATGAGGCTTCAATTTGGAAGTCAAACGAAGCTTGTTGTGGTTATTTGCTTCTTCTGGTGGCCAATTGTTGAATCACAAGTATCTAATCCTCTACCAAAGCCTGCAAGGGCTCTGGATGCAACCTTACAAGACTATGCGTATCGCGCGTTTGTTCATCCGCGTACCGGTGTTCCGTTTGATGGAGTTGTTCCATCGTATTTGACCGGAATCGAGATATCAGCAATGAGGCTCAGAAGTGGTAGCCTGTATCGTCGAGGCGTTGAATCCTTTAAGGAATTTGTAATTCCGGTTGGTTTAAGAGAGCAACCATATGTGGAGAGGCTGGTTTTGGTGTATCAAAACTTAGGGAATTGGTCCACAACTTATTACTCTTTACCTGGTTACATTTATCTAGCTCCCATATTAGGTCTACTTGCTTATAATGGTTCAGATTTGTCGGCGTCTAATCTACCAGAACTCGATTTTTGGGCTTCAGAGGAAGCAATTACAATTAATTTTGGAAGGGTAAGCCCGATACCCGTTGGTACGGTTGCAAAGTGTGCTTGGTTTGATCTACACGGTCAGGTGAACTTCTCAAGTTTGTTAACTGGCAATGTATGTTCGACTACCGAACAGGGGCATTTCTCCATTGTAGCTGAATCAGCTGTGCCTCCTGTTTCCGTACCTCCTGCACCACCTGAACATACGCCGCGTGGACATACACATAGTAGAAAGTACATCGAGGAGAGGATTTGGGGTATCATCGGCGCAGCAACAGGTGGAACTGCATTGTTGGTGTTATTAGCATTGTTGATATTGTGGGCATGGCGGTACAAAAAGAGAAAACGACTGCGTGAATTAGAAAGGGCTGCAGATGTTGGTGAAGCATTGAGGATGACCAGAATTGGGAGCATGAGAGCACCATTTGCATTGGCTACAAGAACGATGCCGAATTTCGAAAGCGATTTTGATGCTTGA 963 44.76 MHMRLQFGSQTKLVVVICFFWWPIVESQVSNPLPKPARALDATLQDYAYRAFVHPRTGVPFDGVVPSYLTGIEISAMRLRSGSLYRRGVESFKEFVIPVGLREQPYVERLVLVYQNLGNWSTTYYSLPGYIYLAPILGLLAYNGSDLSASNLPELDFWASEEAITINFGRVSPIPVGTVAKCAWFDLHGQVNFSSLLTGNVCSTTEQGHFSIVAESAVPPVSVPPAPPEHTPRGHTHSRKYIEERIWGIIGAATGGTALLVLLALLILWAWRYKKRKRLRELERAADVGEALRMTRIGSMRAPFALATRTMPNFESDFDA 320
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00043 320 PANTHER PROTEIN, PUTATIVE (DUF1191)-RELATED 15 318 IPR010605 GO:0016020(PANTHER)
Hean1g00043 320 Pfam Protein of unknown function (DUF1191) 36 214 IPR010605 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00043 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
100681 Hean10g00787 Hean1g00043
402273 Hean11g02568 Hean1g00043
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3223495 Hean Hean16g01764 Hean-Chr16:78461873 Hean1g00043 Hean-Chr1:1372051
3228949 Hean Hean1g00043 Hean-Chr1:1372051 Hean8g02557 Hean-Chr8:90709086
3264594 Hean Hean13g04642 Hean-Chr13:173084818 Hean1g00043 Hean-Chr1:1372051
3280363 Hean Hean1g00043 Hean-Chr1:1372051 Hean10g00787 Hean-Chr10:31925819
3280480 Hean Hean1g00043 Hean-Chr1:1372051 Hean11g02568 Hean-Chr11:114097700
3280962 Hean Hean1g00043 Hean-Chr1:1372051 Hean15g00137 Hean-Chr15:2276733