AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00068 ATGGCGCTCAAACACCATAACTTTTTAACCTTCTGCTTCCTTTTCATCGTCTTCACGATTCACACGGCCACACTCGTTTCTGCCGATGCGATCCAAGGTTGCGGTGGTTTCATCGAGGCGACCTCATCTTTGATCAAGTCAAGGAAACCTACCGATACGAAATTGGACTATTCTCATGTCACGGTTGAGCTGCGTACTTTGGATGGCTTGGTGAAGGAGCGGACACAATGTGCTCCTAATGGTTACTATTTCATCCCTGTTTATGATAAGGGTTCTTTTGTTATCAAAGTTAAAGGACCAGAAGGATGGTCATGGAACCCAGATCAGGTTCCTGTGCTTGTCGATCATGCTGGCTGTAATGGCAACGAAGATATAAATTTTCGGTTTACAGGGTTCAGTATTAGTGGGAAAGTTGTGGGAGCCGTTGGTGGTGCAAGTTGTTCATCTACCAACGGTGGTCCATCAAACGTAAATGTCGAGCTTTTGAATTCCAACGGGGATGTTGTATCTTCTGTTTTTACATCAGTAGCTGGGAGATACTCTTTCACCAATATAATTCCAGGACGATATAACCTACGGGCATCCCATAATGACTTGAGTATTGAAGTTAAAGGCTCAACAGAGGTTGTTGAATTGGGATTTGGAAATATCCAAGTTGACGATGTCTTTTTTGTCACTGGTTATGATATTCGCGGATCGGTAGTTGCACAAGGAAACCCTATTTTGGGGGTTCACTTTTATCTGTACTCTAACGATGTTAAGGAAGTGCACTGCCCACAGGGTTCTGGTAACCCATCTGGAGATAGAACCGCTCTCTGTCATGCAATATCTGACGTTGATGGAAAATTTAATTTCAAATCAATTCCATGCGGTGTTTATGAGCTTATACCTTATTATAAGGGCGAGAATACAGTTTTCGATGTTTCTCCTCCCTCTGTCACTGTGACTGTTCAGCATGATCATGCAACTGTATCTGAAAAGTTTCAGGTTACCGGCTTTTCTGTTGGTGGCCGTGTTGTTGATTCCGAGGGCAAGGGAGTTGATGGCGTAAAAATTGTGGTGGATGGTATGGAGAGGTCCGTTACTGATAAAAACGGATATTATAAGCTCGACCAGGTTACATCCAAACAGTATCTGATTGAAGCGAAAAAGGAGCACTACAAGTTTGACAAATTGATTGACTTCATGGTTTTACCAAATATGGCATCGGTTGCTGATATCAAAGCAGTGTCTTATGATGTTTGTGGCTCAGTGCACACAGTTGATTCTGGTTACAAATCAAAAGTGGCTCTGACTCATGGACCAGATAATGTCAAGCCGCAAATGAAACAAACTGATGATAACGGCTATTTTTGCTTTGAGGTTCCACCCGGTGACTATCGATTATCGGCTATTGCAGTCACACCTGAAACTACACCGCATCTTTTATTCTCACCACCACATATTGATGTTAACGTCAATGGTCCACTGCTGTCACCGAAATTTTATCAGGCACAAGTTAATGTAGGTGGCTCGGTAACTTGCAAAGAAAATTGTGATGCATCTGTTTCTGTTGATCTTGTGAGATTCGGTGCTAAAAGAAATGAAGAAAGGCAGACAGTCGGTTTGACTTTGACTGACCAAAGTAGTGAATTTTTGTTTGAAAATGTCCTGCCGGGAAAATATAAGCTTGAGGTCAAACACGTTTCTAAAGGAGCTAAATCCGGAGAAGATAACTGGTGTTGGGAACAGAGCTCGGTACCTCTTGATGTTGGAACCGAAGACGTTAAAGGGGTTAACTTTGTTCAGAAAGGTTATTGGGTTAACTTAGTTTCTACTCACGATGTAGATGCTTATCTGCATCAGTCTCATGGTTCACGTGTGGATCTGAAAATTAAGAAAGGTTCTCAGCGCATATGTGTTGAATCTCCTGGAGTGCATGAACTTCACTTTGTAAACTCGTGTATACTTTTCGGGAACTCACCTGTGAAAATTGACACGGCCAATACATCGCCTATCTATCTGAAAGGAGAGAAGTATCTACTTCAAGGAGAAATTAAGGTTGACTTGACCTCACAAAATGGCGTTGACCAGTTACCGAAAAATCTAGTCGTTGACATTTTGAACGATGAAGGAACGATTATCGATGGCACTACTGCAAAATTTGTTAATGAGAACGAACAATCAAATAAAGCTCTTTATGAATATAAAGTATGGGCAAATCCTGGAGAAAAACTTACATTTGCACCTCGTGATATTCGGAGCGGAAATGAAAAGAAGATTTTATTTTATCCTAGACAACATCAGGTCAAAGTGGGACAAGACGGCTGTCAAGCGGTACCTCCGTTTTCCGGACGACTCGGGTTGTACATTGAAGGATCGGTTTCTCCCCCACTTCCCGATGTTATTATTCGCATCATAGCTTCCGGAGATAGTCAAAATGGTCAAATCAAGGAAAACGAATTGGCCTTCGAAACGACTACAAACGCAGACGGGTTGTTCGTTGGTGGACCCCTATATGATGACATCACCTACCATACCCAAGCTTCAAAGGCCGGTTATCATGTAAAGGAACTTGGATCAAATTCCTTTTCGTGTCAGAAGCTAGGGCAAATCTCGGTCCGTATACATTCTAAAGAAGGTGCCAATGATTTATTTCCGTCGGTATTGCTATCGTTAAGCGGGGAAGACGGTTATAGAAATAACTCGATATCCGCTGCTGGTGGAACTTTCGTATTTGATAATTTATTTCCTGGAAGTTTTTATCTCCGTCCTCTGTTAAAAGAGTATGCTTTCTCACCATCCGCACAAGCAGTTGAACTCGGGTCCGGTGAGTCCACCGAAGTCGTCTTCCACGCCACACGTGTTGCTTACAGTGCCATGGGTGTGGTTACTCTGTTATCTGGTCTACCAAAAGAAGGCGTTTCGGTCGAGGCCCGTTCCGACTCAAAAGGTTATTATGAAGAAACCGTCACAGATTCATCGGGAAGTTACCGTCTAAGGGGACTTCATCCGGATACGACTTACACGATAAAAATAGCAAAGACAAACGCGTTTGGCGCCTCTAACATCGAACGTGCTTCCCCAGAATCTGTTGAAGTCAAGGTTGGATACGAAGACATCAAGGGGTTAGACTTTTTGGTTTTCGAGCAGCCGGAAATAACCTTATTAACCGGAACGGTTCAAGGAAGCGGGAATAAAGAGTTGCATGAACACCTAAAGTTGGAAATTAGATCGGCTAGTGATCCATCAAATATCGAATCGTTGTTACCTTTGTCTATTTCAAACTTCTTCCAGGTAAAGGGTTTGCCTAGGGGCAAACATCTTCTGCAGCTTCGGTCTACGTTAACACCACGCACCCTCAGATTCGAATCTGACGTCATTGAGGTTGATTTGGAGAAAAATACCCAAGTTTATGTGGGTCCCTTGACGTACAGAGTTGAAGATGATCACCATAAACAGGAGTTGACTCCGGCACCTGTGTATCCACTCATTATTGGAGTATTAGTGATTGCGTTATTTATCAGCATGCCAAGATTAAAAGACATGTACCAAAGCAATGTAGGAGTACTGGTACCGGGACCCAGTGCAACAACGAAGAAAGCCGTGCGAAGAAAGACTTACTAA 3606 42.87 MALKHHNFLTFCFLFIVFTIHTATLVSADAIQGCGGFIEATSSLIKSRKPTDTKLDYSHVTVELRTLDGLVKERTQCAPNGYYFIPVYDKGSFVIKVKGPEGWSWNPDQVPVLVDHAGCNGNEDINFRFTGFSISGKVVGAVGGASCSSTNGGPSNVNVELLNSNGDVVSSVFTSVAGRYSFTNIIPGRYNLRASHNDLSIEVKGSTEVVELGFGNIQVDDVFFVTGYDIRGSVVAQGNPILGVHFYLYSNDVKEVHCPQGSGNPSGDRTALCHAISDVDGKFNFKSIPCGVYELIPYYKGENTVFDVSPPSVTVTVQHDHATVSEKFQVTGFSVGGRVVDSEGKGVDGVKIVVDGMERSVTDKNGYYKLDQVTSKQYLIEAKKEHYKFDKLIDFMVLPNMASVADIKAVSYDVCGSVHTVDSGYKSKVALTHGPDNVKPQMKQTDDNGYFCFEVPPGDYRLSAIAVTPETTPHLLFSPPHIDVNVNGPLLSPKFYQAQVNVGGSVTCKENCDASVSVDLVRFGAKRNEERQTVGLTLTDQSSEFLFENVLPGKYKLEVKHVSKGAKSGEDNWCWEQSSVPLDVGTEDVKGVNFVQKGYWVNLVSTHDVDAYLHQSHGSRVDLKIKKGSQRICVESPGVHELHFVNSCILFGNSPVKIDTANTSPIYLKGEKYLLQGEIKVDLTSQNGVDQLPKNLVVDILNDEGTIIDGTTAKFVNENEQSNKALYEYKVWANPGEKLTFAPRDIRSGNEKKILFYPRQHQVKVGQDGCQAVPPFSGRLGLYIEGSVSPPLPDVIIRIIASGDSQNGQIKENELAFETTTNADGLFVGGPLYDDITYHTQASKAGYHVKELGSNSFSCQKLGQISVRIHSKEGANDLFPSVLLSLSGEDGYRNNSISAAGGTFVFDNLFPGSFYLRPLLKEYAFSPSAQAVELGSGESTEVVFHATRVAYSAMGVVTLLSGLPKEGVSVEARSDSKGYYEETVTDSSGSYRLRGLHPDTTYTIKIAKTNAFGASNIERASPESVEVKVGYEDIKGLDFLVFEQPEITLLTGTVQGSGNKELHEHLKLEIRSASDPSNIESLLPLSISNFFQVKGLPRGKHLLQLRSTLTPRTLRFESDVIEVDLEKNTQVYVGPLTYRVEDDHHKQELTPAPVYPLIIGVLVIALFISMPRLKDMYQSNVGVLVPGPSATTKKAVRRKTY 1201
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00068 1201 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 23 1179 IPR051417 GO:0005789(PANTHER)
Hean1g00068 1201 SUPERFAMILY Starch-binding domain-like 951 1038 IPR013784 GO:0030246(InterPro)
Hean1g00068 1201 Gene3D Immunoglobulins 964 1028 IPR013783 -
Hean1g00068 1201 SUPERFAMILY Cna protein B-type domain 876 936 - -
Hean1g00068 1201 Gene3D - 335 414 - -
Hean1g00068 1201 SUPERFAMILY Cna protein B-type domain 148 199 - -
Hean1g00068 1201 Gene3D Immunoglobulins 146 222 IPR013783 -
Hean1g00068 1201 Pfam BOS complex subunit NOMO1-like, first beta sandwich domain 51 127 IPR055075 -
Hean1g00068 1201 SUPERFAMILY Carboxypeptidase regulatory domain-like 334 426 IPR008969 -
Hean1g00068 1201 Pfam BOS complex subunit NOMO1-like, beta sandwich domain 781 855 IPR055073 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00068 K26500 BOS complex subunit NOMO