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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00083 ATGGATGGAACCTATAACAGGCCAAGCAATTTCAGCTACCAAACAGACCGGCGGCTGGAGATTGTGAGCGGCAAAGGGAACCAAATCTACGCCGCCGGAGGCGGCGGCAGGTCGCCGGAGTATGCGCCGAGGGTGTCGACGTCGTCGGCGAAGCCGTGGGGCGGGTTTAGTGATCCGGAGAGTAAACGAAAGAAGAGGATTGCCAAGTATAAAGTGTACACGATTGAAGGACGAGTGAAGGCTTCGTTTAGGAATGGGATTCGTTGGATTAAGGCCAAGTGTTCTGATTTTATTCATGGCTTGTGA 306 52.94 MDGTYNRPSNFSYQTDRRLEIVSGKGNQIYAAGGGGRSPEYAPRVSTSSAKPWGGFSDPESKRKKRIAKYKVYTIEGRVKASFRNGIRWIKAKCSDFIHGL 101
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00083 101 MobiDBLite consensus disorder prediction 33 60 - -
Hean1g00083 101 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 40 100 - -
Hean1g00083 101 Pfam Domain of unknown function (DUF3511) 56 100 IPR021899 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00083 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3228978 Hean Hean1g00083 Hean-Chr1:1958125 Hean3g01053 Hean-Chr3:57059591
3269446 Hean Hean1g00083 Hean-Chr1:1958125 Hean9g00042 Hean-Chr9:3449491
3279594 Hean Hean1g00083 Hean-Chr1:1958125 Hean12g00575 Hean-Chr12:11765734