AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00085 ATGGGAGGTCTAAATCTAAAAAGATACTGGCGGAGGAGAAGCTACCAACGCCTCGGTGCCACTACCGATGAATCGCGATCAAAGCGGAAGTGGTCATGGAAGATAAGGATGCCACGAAGGCTGAAGATAAAGCTGAGGTTTAACTCCAAGAAGTTTATTGCTAATGTTCATGAAGCATACGTGAGAATGATGATGAGGATAGCGAGTTCGCCGGTCGTGAGAAGCGGATCAATAGGCGGGTATGGTGCAGGAGGGTTCAGTCAGTTTGGGATGAGACCCATGAAGGAGTACGACGAGAAGGTGATAATTCAGATGTATAACTCGTTGGTTGTGAGACAGGCTCAACTCAAAGCCCTCGAGGCCGAGCCCGTTACCGGTAACTCTAGATCATGTGTTGTCTAA 402 48.26 MGGLNLKRYWRRRSYQRLGATTDESRSKRKWSWKIRMPRRLKIKLRFNSKKFIANVHEAYVRMMMRIASSPVVRSGSIGGYGAGGFSQFGMRPMKEYDEKVIIQMYNSLVVRQAQLKALEAEPVTGNSRSCVV 133
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00085 133 PANTHER BNAA09G40010D PROTEIN 5 117 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00085 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
402283 Hean11g02599 Hean1g00085
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3228979 Hean Hean1g00085 Hean-Chr1:1995912 Hean4g03225 Hean-Chr4:173189836
3280492 Hean Hean1g00085 Hean-Chr1:1995912 Hean11g02599 Hean-Chr11:116366361
3280958 Hean Hean1g00085 Hean-Chr1:1995912 Hean15g00195 Hean-Chr15:2715359
3281028 Hean Hean1g00085 Hean-Chr1:1995912 Hean4g03224 Hean-Chr4:173090821
3281189 Hean Hean1g00085 Hean-Chr1:1995912 Hean6g00473 Hean-Chr6:8508985