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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00093 ATGGAATCAAAGGGTACGAGATTTGCTTCGATTGTTCTTTTGTCGTTGGCGGTTGTGTTGTTTGCTTATGTTTCGGCAGACGGTGGTTATGGGAAGTCGCAGCTAGAGGGATATATGCCACCAAAACCAGCAACACCAAAAGAACAGACGGGGTATGAAAAACCCAATCCTAAGTTACCAACAAAGCCTAAGTTGCCGACGAAACATGTGGCACCCAAAGAGGAGCATGGAGCATATGAGAAGCCGAAGCCTAAGTTGCCAACAAAGCCTGAGGTACCAAAATATGACCAGAAAAGTTATCAAAATAACTATCCTAAGGTACCATCAACCAAAAAGCCGTTGGTACCCAAGGTGCCAGAGCATCCGAAGAACATAGCGGTTCAAGGTCTTATTTATTGTAAATATGGTTCCAAACTCCTCCCGATTCAAGGAGCGACTGCGAGAGTGACTTGTTTGGCGGTGCACAAGAACGGATATGAATCCGCTCCATTTTCATTCTCGAGTTGTCCAGCAGACGAAAAGGGTTACTTCTTGGCCAAACTACCATCATCGACGCTTGTGAAGGATGATCTATGGGAGATCACAGAATGCAAGGCTTTCCTTGAAAACTCGCCATGGACGAGCTGCAACGTTCCAGAAGATACCAACGGAGGAATTAAGGGTGTTCGTGTTACATTTTCTCGTCATCTCAACAGCAGTGGATTTTGTTTGTCATCCGTAGGCCCTTTTATATACACCCCGGGACCCAAAGAAGGTTACTAG 762 45.67 MESKGTRFASIVLLSLAVVLFAYVSADGGYGKSQLEGYMPPKPATPKEQTGYEKPNPKLPTKPKLPTKHVAPKEEHGAYEKPKPKLPTKPEVPKYDQKSYQNNYPKVPSTKKPLVPKVPEHPKNIAVQGLIYCKYGSKLLPIQGATARVTCLAVHKNGYESAPFSFSSCPADEKGYFLAKLPSSTLVKDDLWEITECKAFLENSPWTSCNVPEDTNGGIKGVRVTFSRHLNSSGFCLSSVGPFIYTPGPKEGY 253
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00093 253 PANTHER OS01G0164075 PROTEIN 12 248 - GO:0071944(PANTHER)
Hean1g00093 253 MobiDBLite consensus disorder prediction 32 117 - -
Hean1g00093 253 Pfam Pollen protein Ole e 1 like 127 221 - -
Hean1g00093 253 MobiDBLite consensus disorder prediction 67 92 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00093 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
100670 Hean10g00697 Hean1g00093
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3204705 Hean Hean10g03011 Hean-Chr10:156412885 Hean1g00093 Hean-Chr1:2076939
3204706 Hean Hean10g03012 Hean-Chr10:156450432 Hean1g00093 Hean-Chr1:2076939
3252991 Hean Hean1g00093 Hean-Chr1:2076939 Hean1g00096 Hean-Chr1:2082428
3280494 Hean Hean1g00093 Hean-Chr1:2076939 Hean11g02607 Hean-Chr11:116668805