AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean1g00100 | ATGAAGAATATGAAATCAAACTCCATTTTGTCTCTTGGTTTTCTTTTGTTTATGCTTATTTTCTCTCATCCATCATCAACTCATGCTCAAGAAGTTGAGGATCAAAGCGGATTTGATTATTTGAGAGGTAGCACGATGGGGCCGGATAGATGGGGTGCGATGAGGAATGATTGGTCGTTGTGCAGCAATGGGACGATGCAGTCTCCCATTGATATGTCGAGTCGAAGGGTGGTGATGGTGGACCATCCTAAGAATCTATACAGAAACTATAAGCCTTGTAATGCAACCATGCTTAACAGAGGTCATGACATTATGGTTAAATGGATAGGAGATGCAGGATCAATTATCATCAATGACACTGAGTATGCTTTAAAACAAGCACATTGGCACTCACCTTCTGAGCATACCATCAATGGCATAAGGTTTGACATGGAACTACATATGGTCCATTTAAGCATCGACAACAAAATAGCTGTCATTGCTGTACTTTATACAATCGGCAGACCTAGCCATTTTCTTTCTAGGTTGGCTTTAAACATATCATCTATGATAGATCGAAAGGGCATGCGTGAACATAGTGGGATAGTAAATCCTAGAGAGATTCAAATGAGCAGTAGGATGTATTACCGATATATCGGTTCACTCACGGTCCCTCCTTGCACCGAGAAAGTTGTTTGGACCATTAGCAGAAGGATAAGAACAGTTTCAATACGTCAAGTTAAATTACTTCGGGAGGCTGTAAATGATTATGCAGAACATAATGCAAGACCAGTACAACCAGACAATCTACGAGACATTCTTCTTTATGCCCAAGCTCGAGAGAGGAAATAG | 831 | 40.67 | MKNMKSNSILSLGFLLFMLIFSHPSSTHAQEVEDQSGFDYLRGSTMGPDRWGAMRNDWSLCSNGTMQSPIDMSSRRVVMVDHPKNLYRNYKPCNATMLNRGHDIMVKWIGDAGSIIINDTEYALKQAHWHSPSEHTINGIRFDMELHMVHLSIDNKIAVIAVLYTIGRPSHFLSRLALNISSMIDRKGMREHSGIVNPREIQMSSRMYYRYIGSLTVPPCTEKVVWTISRRIRTVSIRQVKLLREAVNDYAEHNARPVQPDNLRDILLYAQARERK | 276 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean1g00100 | 276 | ProSitePatterns | Alpha-carbonic anhydrases signature. | 133 | 149 | IPR018338 | GO:0004089(InterPro)|GO:0008270(InterPro) | |
| Hean1g00100 | 276 | PANTHER | CARBONIC ANHYDRASE | 22 | 262 | IPR023561 | GO:0004089(InterPro)|GO:0006730(PANTHER)|GO:0008270(InterPro)|GO:0016836(PANTHER) | |
| Hean1g00100 | 276 | ProSiteProfiles | Alpha-carbonic anhydrases profile. | 36 | 270 | IPR001148 | - | |
| Hean1g00100 | 276 | CDD | alpha-CA-prokaryotic-like | 47 | 268 | IPR041891 | - | |
| Hean1g00100 | 276 | SUPERFAMILY | Carbonic anhydrase | 38 | 266 | IPR036398 | - | |
| Hean1g00100 | 276 | Gene3D | Alpha carbonic anhydrase | 35 | 276 | IPR036398 | - | |
| Hean1g00100 | 276 | SMART | Carb-anhydrase-2a | 40 | 270 | IPR001148 | - | |
| Hean1g00100 | 276 | Pfam | Eukaryotic-type carbonic anhydrase | 47 | 267 | IPR001148 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean1g00100 | K01674 | carbonic anhydrase [EC:4.2.1.1] |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 3208807 | Hean | Hean11g04177 | Hean-Chr11:180057802 | Hean1g00100 | Hean-Chr1:2128848 | |
| 3208808 | Hean | Hean11g04179 | Hean-Chr11:180138611 | Hean1g00100 | Hean-Chr1:2128848 | |
| 3208809 | Hean | Hean11g04180 | Hean-Chr11:180158183 | Hean1g00100 | Hean-Chr1:2128848 | |
| 3228990 | Hean | Hean1g00100 | Hean-Chr1:2128848 | Hean1g02542 | Hean-Chr1:121363876 | |
| 3269450 | Hean | Hean1g00100 | Hean-Chr1:2128848 | Hean11g03609 | Hean-Chr11:165883305 |