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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00105 ATGAAGTTAGGTCATTTCACGAGGGAATTTCATTTACCGGAGAGATTAAACGTTCTGCTCTTAAAGCATCCGGGGATATTCTATGTTTCAAATAAGTATCAAATTTATACTGTTTTACTTAGAGCAGGGTCAAAATTGGTTGAAAAAGACCCGCTTGTAGTTGTGAAGGATCCGCTGCGCGGCCATAATTAA 192 38.54 MKLGHFTREFHLPERLNVLLLKHPGIFYVSNKYQIYTVLLRAGSKLVEKDPLVVVKDPLRGHN 63
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00105 63 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 2 57 IPR045040 GO:0003723(InterPro)
Hean1g00105 63 Pfam Plant organelle RNA recognition domain 2 57 IPR021099 GO:0003723(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00105 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:2244581 Hean5g03605 Hean-Chr5:174355328 dispersed