AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00123 ATGAAATTGCTTCATAAAAAACTTGTTAAAATACATTTAGGCAATAATACAAGGGTTGCAATTGAAATATCCCAAACCGGGCGTACGGGTCTAAAACTGCAGACTTTTGAAGGAGTGAAGAAGAAGAAGACAAGAATGGACACGAACACCGAGTTGTACCACGATGTTCCGTGCTCTTCGATCGCCGTAGAATCCATCATTAGCGTCGGAACCGGCGGATTAATCTGGGGTTTATGTTCTGGTTCCTACGATGCCAAACAAAAAGGTCTGACCGGTATTTCTCGAGCTTCTTTCCTTGCCAAGACGGTTGGTAAATATGGGTTCCAATGTGGACTCTTTGCCGGAATCTTTTCGTTTACGCGCTGTGGGATTCGAAGATACCGCAAGAAAAGTGATTGGGTGAATGCTCTAGTTGCAGGTGGAGTTGCAGGGGCAGCCATTGGTGCTGGAACCCGAAACTGGCGGCAGGTTGCAGTGATGACCGCTTTCCTTTCTGGGTTTTGTGCCATTGCTGACCAATCAAGAGCAATCTGA 534 46.25 MKLLHKKLVKIHLGNNTRVAIEISQTGRTGLKLQTFEGVKKKKTRMDTNTELYHDVPCSSIAVESIISVGTGGLIWGLCSGSYDAKQKGLTGISRASFLAKTVGKYGFQCGLFAGIFSFTRCGIRRYRKKSDWVNALVAGGVAGAAIGAGTRNWRQVAVMTAFLSGFCAIADQSRAI 177
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00123 177 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 59 173 IPR039175 GO:0008320(PANTHER)|GO:0030943(PANTHER)|GO:0042721(InterPro)|GO:0042721(PANTHER)|GO:0045039(PANTHER)|GO:0045039(InterPro)
Hean1g00123 177 Pfam Tim17-Tim22-Tim23-Pmp24 family 63 167 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00123 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:2520528 Hean1g00125 Hean-Chr1:2568973 proximal