AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00129 ATGGTATTGATAAAAAAGTTTAATCCAACCGCCCCTTCTTGCGATGTTTCTATTGACAAACCGATTCCTGGTTCGATTGCTTTGTATTGTCGCCATTTTCAATGGTCCAATCTTCGTTACCCTTTTTCGTTTTTTGTTCTAAACTTGCTTGAGTATTACCGAGTGTCTTTTGGGCAAGTTCATCCAAAAGGAATGGCTAGGGTTTTGCACTTTGAAGTGCTCTGTCGTGCTCTTGGCTATGATCCCTCTCTGTTGCTTTTCCGGAGGTTTTTTCGTTTAGCCAAAAATGGCGATTGGTCTACTTTTGAAACGACAAAGGTTGATACTTGTCTCATTTCATCCATGGTTACAACCCTTGGATCCTGGAAGGATCAGTTTTTCTGGGTTTCTGATTCTATCATTCCTTTCAAAATGGTATGGAGGCGTCCGGATGCTGTTCTCAATGATCCGGAGCCTTCTGAGTCTGAATTGAATGATGCCTTTCTTTCAGCCATTCGGGGGTGCCCTTCGAGGGTTCGTCCCTTTCCCGAACATTTGTTAGTGCTTTTAGGGGTTAGTAATATTTGGGCAAAAGCCGATCGGGATCCGGTGTTAATGAGAAATGGTCTTGTTATGTCTGCTTTGGACTTTATCAAAAGTGACGACACGTCTGATGTTGTTTTTGAGGATGCCCCGACTGTTCCGGGTGAGAATGTTGTGGTGAGAACTTCCGAGCAAAGGTTTGAGGGCACGGGTTATGCTAATGTTGCCAATGTTAAGGGTTTTACCAAGTTTACTGCCCCCAAGTCTTCAAGTCGCCGATCTTCTCGTCGTTTGCTGAAAGCTGGGCCTCAATCCACTTCCACTGAGCCAGTGGATTTGACTGTGGATTTGACTGATGATATTGAGGTTTCAGAGGATCAGGTTGAAGCGGGTGTTGAACAAGATAAGGAGTTGGTTGTTTATGGCAAGAAGGTTCGAGGTAAGAAGGTTATTCCTGTTCAAGAATCTTCAAGCAGGGACGCTGGAGGGTTGGACCCTGAAGGTGTTTATGTGCCTGCTTGGCAAGTGAAGAATGATGATACCTTTAAGGATGCTGCCGTTTGTGAGGATGCTCTTAGTCATCTTGCTCCTCCCTCTGTTCGTGAAACCATTGCTGAGATGGACGATGACTTTATGTTATCTCGCATGGTTTTAACCACTTGTAACCTTGCTTCCATGCTTCCCCAAGGGATTACTCGCTTTCGCCAAAGGATGCGGGAGTATGAGGATTTTTCTAAAAAGAAGGACAAGATGAAATCCTCCCTAGCATCAATGAAGAAGGAAGTGGCAGGGTTTGCAGAGAAGGAGGCAGCGTGGAAGAAGGAGGTTGATGGTTTGAAGAAGATGCATGATATTGAGATGGGTGACCTGAGGAAGAGCTTTGAAGCAAACTTGTTGAAGTTGAAGGCTGATCGAGAGGCCTTGTCCATCCAGCAGCAGGCTTTTCGTGAAGAAAAGGAGGGGTTGAAAGCTTCAGTTGGTCAGGTGACTGCGGACAATCAATGGTTGATCGAGCATGGTTTCCAGCAGGTGGTTACTTACCTTTTGCATTCCAAGGAATTTAACTCTGCCCTTGGTGATGTTTACACAAAGCTGCTGAACCTGGGGAAGCATCAAGGCCTTACTGCTGGCTATAAACTTCATGAATCTGGACAACCTTTGGAGAAGTCACCCATGTTTCGCCCCGAGGCTTCTGATATCTTCAAGGCCTCTGTTGAGCAGATGGAGAGGCTAACCTACCCTTACATTCATGAGGTATCCTCTTGCTTTGGTAAGCCTTTGTCTGTTTTACAGGGATTGAAGCCTGAGGGGTTGAATGAGAAAGTTTGTGCTGAGGTTTTGGATTCCTTGTCAAGGAAGAGGTCATACTCTGGGGATAGTGATGATACCCTCTCGAGTTTGCCTGAGGCTTCAAAGGATGCTGGTTTAGAGACCTCCGCGGTAGGTGGTGAAGAAGGGGCTAAGATGAAGAAGACTAAGAAAGCCAAGAAGTCTAAAGTTGAAGGTTCCAAGCCTTCTATTAACTGA 2049 45.49 MVLIKKFNPTAPSCDVSIDKPIPGSIALYCRHFQWSNLRYPFSFFVLNLLEYYRVSFGQVHPKGMARVLHFEVLCRALGYDPSLLLFRRFFRLAKNGDWSTFETTKVDTCLISSMVTTLGSWKDQFFWVSDSIIPFKMVWRRPDAVLNDPEPSESELNDAFLSAIRGCPSRVRPFPEHLLVLLGVSNIWAKADRDPVLMRNGLVMSALDFIKSDDTSDVVFEDAPTVPGENVVVRTSEQRFEGTGYANVANVKGFTKFTAPKSSSRRSSRRLLKAGPQSTSTEPVDLTVDLTDDIEVSEDQVEAGVEQDKELVVYGKKVRGKKVIPVQESSSRDAGGLDPEGVYVPAWQVKNDDTFKDAAVCEDALSHLAPPSVRETIAEMDDDFMLSRMVLTTCNLASMLPQGITRFRQRMREYEDFSKKKDKMKSSLASMKKEVAGFAEKEAAWKKEVDGLKKMHDIEMGDLRKSFEANLLKLKADREALSIQQQAFREEKEGLKASVGQVTADNQWLIEHGFQQVVTYLLHSKEFNSALGDVYTKLLNLGKHQGLTAGYKLHESGQPLEKSPMFRPEASDIFKASVEQMERLTYPYIHEVSSCFGKPLSVLQGLKPEGLNEKVCAEVLDSLSRKRSYSGDSDDTLSSLPEASKDAGLETSAVGGEEGAKMKKTKKAKKSKVEGSKPSIN 682
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00129 682 PANTHER OS06G0165300 PROTEIN 7 521 - -
Hean1g00129 682 Coils Coil 465 485 - -
Hean1g00129 682 MobiDBLite consensus disorder prediction 260 284 - -
Hean1g00129 682 MobiDBLite consensus disorder prediction 627 682 - -
Hean1g00129 682 Coils Coil 415 435 - -
Hean1g00129 682 Pfam Putative gypsy type transposon 33 93 IPR007321 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00129 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr15:168806757 Hean1g00129 Hean-Chr1:2601013 dispersed
Hean Hean-Chr1:2601013 Hean1g03063 Hean-Chr1:134129917 dispersed
Hean Hean-Chr1:2601013 Hean7g01955 Hean-Chr7:119265235 transposed