AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00132 ATGGCGAACACGGAAGCAGAAGAGAAACCGGTGATGATCGTGGGAATCGACGACAGCGATCACAGTTTTTACGCACTTGAATGGACTCTGGATCACTTTCTAGCATCTTCTGCTCCCAACACTCCCTTCAAGCTAATCGTTGTTCATTCCAAACCTTCTCCTACTTCCGCTATAGGTTTCGCCGGTCCTGGTGCGGCTGATGTGTATCCGTTTGTTGATTCGGATTTGAAGAAGATTGCTGCGAGAGTAGTGGAAAAGGCGAAGGAGCTCTGTCATTCGAAATCGGTGGATGACGTGCTTGTTGAAGTTGTGGAAGGTGATGCTAGGAATGTTCTATGTGAAGCTGTAGAGACGCACCATGCTAGGCGAAGCTTGGGGGGTCGATTTTTCCCAATTCCGCGGGGGCGAAAACGTATATACCTAAAAATTTCTATACGAAGGTACTGTTCATAA 453 47.46 MANTEAEEKPVMIVGIDDSDHSFYALEWTLDHFLASSAPNTPFKLIVVHSKPSPTSAIGFAGPGAADVYPFVDSDLKKIAARVVEKAKELCHSKSVDDVLVEVVEGDARNVLCEAVETHHARRSLGGRFFPIPRGRKRIYLKISIRRYCS 150
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00132 150 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 121 - -
Hean1g00132 150 Gene3D HUPs 5 123 IPR014729 -
Hean1g00132 150 Pfam Universal stress protein family 12 121 IPR006016 -
Hean1g00132 150 CDD USP-Like 12 121 - -
Hean1g00132 150 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 6 121 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00132 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
100663 Hean10g00633 Hean1g00132
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:2629327 Hean1g03253 Hean-Chr1:138393901 dispersed
Hean Hean-Chr1:2597599 Hean1g00132 Hean-Chr1:2629327 proximal