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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00139 ATGGACTCCACCTCACAAGAACTCAAACACAGAGCCACCACCACCACCACAGAAGACCAATCTCCAACCCTTCAACCCAACACAAAAACTCAAAAACAACGTATCCCGACACGTGGCATCCGCTCACTGGCTGTCGGGATCGCGATCCCGTTAGCTCTAACCTTAGCCAACATATCTATCTTCGGCTGGAACCGAACCTACCGAACCATCCACAAACCGTTCTGGGTCCCACCGTTATGGGCTCTACATTTAACATGTTTGGGTTCGGCTTTTATTATGGGTTTATCGGCTTGGCTTGTTTGGGCTGAAGGGGGGTTTCATAAGAACCCGAGTGCGGTCGGGTTTTATTTGGGGCAGTTGGGGCTGAGCCTGGCTTGGGACCCGGTGTTTTTTAAGATGGGTGCGGCTAGGTTGGGTTTGTTGGTGTGTTTGGGTCAGATGGCGACTATGTGGTCTTGTTTGAAGATGTTTGGGCGGGTTAACCGGACTGCGGGTGATTTGGGTATGGTGAAGGGGGTTTTTGTGTATAGAAGTTTATGCTTTCATGTTTTGTGGTCTTGCAATGTAATAATATGA 576 49.31 MDSTSQELKHRATTTTTEDQSPTLQPNTKTQKQRIPTRGIRSLAVGIAIPLALTLANISIFGWNRTYRTIHKPFWVPPLWALHLTCLGSAFIMGLSAWLVWAEGGFHKNPSAVGFYLGQLGLSLAWDPVFFKMGAARLGLLVCLGQMATMWSCLKMFGRVNRTAGDLGMVKGVFVYRSLCFHVLWSCNVII 191
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00139 191 Gene3D TspO-MBR protein 39 187 IPR038330 -
Hean1g00139 191 MobiDBLite consensus disorder prediction 8 35 - -
Hean1g00139 191 FunFam translocator protein 2 39 171 - -
Hean1g00139 191 Pfam TspO-MBR family 49 167 IPR004307 GO:0016020(InterPro)
Hean1g00139 191 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 29 169 IPR004307 GO:0016020(InterPro)
Hean1g00139 191 CDD TSPO-MBR 43 167 IPR004307 GO:0016020(InterPro)
Hean1g00139 191 MobiDBLite consensus disorder prediction 1 35 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00139 K05770 translocator protein
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Event-related genes

Select Gene_1 Gene_2 Event_name
100665 Hean10g00648 Hean1g00139
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr10:25399273 Hean1g00139 Hean-Chr1:2900691 dispersed