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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00140 ATGGATAAAGACGGAGATGGCAAGCAAAATACCGCTGACATGACACAGTTTGTTCAAACTCTTCTCCAGCAGATGCAAAACAGATTCCAAACAATGTCAGACTCTATTGTTTCAAAGAATATCCTTTTTGCATACCTGTTTATCAAAATTTTATAG 156 35.9 MDKDGDGKQNTADMTQFVQTLLQQMQNRFQTMSDSIVSKNILFAYLFIKIL 51
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00140 51 Gene3D - 9 41 - -
Hean1g00140 51 PANTHER HEAT SHOCK FACTOR BINDING PROTEIN 1 2 39 IPR009643 GO:0003714(InterPro)|GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0070370(PANTHER)
Hean1g00140 51 Pfam Heat shock factor binding protein 1 13 39 IPR009643 GO:0003714(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00140 K19765 heat shock factor-binding protein 1
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr6:10813225 Hean1g00140 Hean-Chr1:2906153 transposed
Hean Hean-Chr1:2906153 Hean4g03273 Hean-Chr4:174621852 wgd