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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00141 ATGACTTATTTTTCTTTCACAAATCTTCTTCTTCTTCACCTCCTAATAACCTCCGTCACACTTTTCCGTCCATCAGCCGCCGGCTCAGCCGACTTCACCTGGCTGGCTAACCAAGCCGGCTCATGCAGCGGCTCTGTCGGTGAGTGTATGGGTGGTGGTACTACAGGAGAGTTGGAGATGGAGTCGGAGAGCACCAGGCGCATTTTAGCGACGACGAAGTATATCAGCTATGGTGCGCTGCAGGGGAACAATGTACCGTGCTCGCAAAGAGGTGCGTCTTATTATAACTGTCGGTCTGGTGGTCAGGCGAATCCGTACCAACGTGGTTGCAGTGCGATTACTAGGTGCCGGCGTTGA 357 52.94 MTYFSFTNLLLLHLLITSVTLFRPSAAGSADFTWLANQAGSCSGSVGECMGGGTTGELEMESESTRRILATTKYISYGALQGNNVPCSQRGASYYNCRSGGQANPYQRGCSAITRCRR 118
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00141 118 Pfam Rapid ALkalinization Factor (RALF) 57 118 IPR008801 -
Hean1g00141 118 PANTHER RAPID ALKALINIZATION FACTOR-LIKE 9 118 - GO:0009506(PANTHER)|GO:0019722(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00141 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
103072 Hean1g00141 Hean6g00018
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr13:123416901 Hean1g00141 Hean-Chr1:2941756 dispersed
Hean Hean-Chr1:2941756 Hean6g00018 Hean-Chr6:405981 dispersed
Hean Hean-Chr1:2941756 Hean4g03274 Hean-Chr4:174628702 wgd