AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00154 ATGACAGAAAACGAGCGGTTACAACTCATGAATGCAAAGGGTGAGTTTTGTGTTGTAGGTTGTGAAACCGACAATGGTTTGGTTCCGGTTCCGGTTCCTTGTTCATCAAGGGAAGAATGTTGGAGCGCGATTGAACATGATAGTTTTATTCTTGGTTTATATATATTTGGCAAGAATCTTCGCGTTGTGAACAAGTTCATAGGGGATAAAGGTATGCCAAATGTTATATCGTATTACTATGGGAAGTTTTATAGAAGCGGTGAATACCAAAAGTGGTCGATGTATCGGAAAAAAAGAATTAAAAAGTCTCTTCCTGGAAAAAAGATTTTCAGAGGGTGGAGGCTGCAAGAGCTTTTGTCTCGATTGCTTTCTAATGTGACCGACGAGTGTAAAGCTAGTTTGACTCAGGTTATTAAAACGTTTGAGGAGGGAAAACTTTCGTTTGAGAAGTATGTGTTCACTTTAAGGGATACGATGGGCCTCGATCTTCTTGTACAAGCCGTAGCCATTGGTAAAGGGAAACAAGACCTTACTATCAAGACCCGAACGCGATTAAGAAGCAAGAAAGTTGAATCTACTTGCTCGTTTCTTAAAACGGAAGAAATTGTTGATATTTTGAAAGATCGAATTGGATTAAGCAAAACGCGGTTAAATGAGTTCTTCTGGGCCGCTGTGTGGCCTCGGCTTTTGGCTAGAGGATGGCACTATGAACAGGCTAGAAACTACGCGTTCGAAAACTCGAAGAATTTAGTGTTTCTTGCACCTGGTGTGACAAAGTTTTCAAGGAGGAGTCTGGTCAAAGGAAGTCAATATTTTGAGTCGTTGACTGAAGTGCTGAATAAAGTTGCATCTGAACCGCACCTTCTTGAACACGAACCTGACAAGGACCGGTCGGTCGACCCACATGAAGCACACGGGTCAGATGATGAACAAGATTCGATGAAATGCACGGTTGTGGATACCAGTTTCGTTGGGCTAGTCAAAGTCAGAGAGCTCGCGAGTTTGACTGATTTTAAACCTGCAGATATGCAAGCGTCGGCTAGTGTTTCTGGAGAAAGCGAACATGACACAACAGAAGAACCTCAAAACGAAGATGTGAATCTTAAGAAAGCCGAAAATACCAAAATGGATCTCTCTACAGATGTGCAGCCAGCAAGAAAACTGAAGTTGGTATTCAAACGAAAAACAAAACGTCAAACGGTTGACAATATTAAAAACGACAACACTCGTGGTGAAGATGAAGACATGGAAGATGCTGCATGTTCTAAGAACAAGCGTACAAAGATAGTGAACGACTTGAACAACAACCCTCGAGCGGGTCCCAGTTCAGACGATGATAACAAATCATCTTCTGCTAAATCATCAGTTGTAACTGACTCGTTGACTATTGCTAATGGTCAACGACAGAGTAGAAGAAACCGTGCAATGACGACAAAAGCGTTGGAAGCTCTTGAGAATGGATTCATGAACCCAGAAAAGACGAGGAGAGAGGCGCAGGATAGGACCTGGAAGCGTGTTCCTGCTAAAACGGCCCTTGTATCGAGTGTTTTGCATCGGAACATTAGAATTTAA 1572 42.3 MTENERLQLMNAKGEFCVVGCETDNGLVPVPVPCSSREECWSAIEHDSFILGLYIFGKNLRVVNKFIGDKGMPNVISYYYGKFYRSGEYQKWSMYRKKRIKKSLPGKKIFRGWRLQELLSRLLSNVTDECKASLTQVIKTFEEGKLSFEKYVFTLRDTMGLDLLVQAVAIGKGKQDLTIKTRTRLRSKKVESTCSFLKTEEIVDILKDRIGLSKTRLNEFFWAAVWPRLLARGWHYEQARNYAFENSKNLVFLAPGVTKFSRRSLVKGSQYFESLTEVLNKVASEPHLLEHEPDKDRSVDPHEAHGSDDEQDSMKCTVVDTSFVGLVKVRELASLTDFKPADMQASASVSGESEHDTTEEPQNEDVNLKKAENTKMDLSTDVQPARKLKLVFKRKTKRQTVDNIKNDNTRGEDEDMEDAACSKNKRTKIVNDLNNNPRAGPSSDDDNKSSSAKSSVVTDSLTIANGQRQSRRNRAMTTKALEALENGFMNPEKTRREAQDRTWKRVPAKTALVSSVLHRNIRI 523
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00154 523 MobiDBLite consensus disorder prediction 342 369 - -
Hean1g00154 523 MobiDBLite consensus disorder prediction 427 474 - -
Hean1g00154 523 PANTHER ATROPHIN-RELATED 24 373 - GO:0003714(PANTHER)|GO:0005634(PANTHER)
Hean1g00154 523 MobiDBLite consensus disorder prediction 353 369 - -
Hean1g00154 523 MobiDBLite consensus disorder prediction 395 425 - -
Hean1g00154 523 MobiDBLite consensus disorder prediction 284 314 - -
Hean1g00154 523 SUPERFAMILY Homeodomain-like 40 87 IPR009057 -
Hean1g00154 523 MobiDBLite consensus disorder prediction 394 474 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00154 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
402287 Hean11g02626 Hean1g00154
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr11:117747560 Hean1g00154 Hean-Chr1:3117519 dispersed
Hean Hean-Chr13:5652915 Hean1g00154 Hean-Chr1:3117519 dispersed
Hean Hean-Chr13:121250646 Hean1g00154 Hean-Chr1:3117519 dispersed
Hean Hean-Chr17:56192786 Hean1g00154 Hean-Chr1:3117519 dispersed
Hean Hean-Chr1:3117519 Hean1g02839 Hean-Chr1:129538326 dispersed
Hean Hean-Chr1:3092443 Hean1g00154 Hean-Chr1:3117519 tandem