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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00181 ATGTTTACACTCCATTTTCATTACGAAGATGTATCACGTCAGGATCCGTTGCTCAAACCGAATCACGCCAACGTTATGGAAGTTCCTGGATCGTGTAAAATAAGAGTAGTACCAAAGGCAGCACCTTCTGATTTCATAATCAAAAATGGAAAATTGGCTATGGAGATTCCGTGCGGGCAGAAATTAATACAGACACAAAGGGCTTCGACAGGAAAGTCGTTTCGATCCAATCCATTCTTGGGGTCAAATAAAGAAAAAAAGGATATGTCAGTGACCTAG 279 40.86 MFTLHFHYEDVSRQDPLLKPNHANVMEVPGSCKIRVVPKAAPSDFIIKNGKLAMEIPCGQKLIQTQRASTGKSFRSNPFLGSNKEKKDMSVT 92
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00181 92 MobiDBLite consensus disorder prediction 66 92 - -
Hean1g00181 92 SUPERFAMILY RL5-like 1 81 IPR022803 -
Hean1g00181 92 Gene3D - 3 88 IPR022803 -
Hean1g00181 92 MobiDBLite consensus disorder prediction 66 80 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00181 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr13:17153050 Hean1g00181 Hean-Chr1:4597493 dispersed
Hean Hean-Chr13:17176797 Hean1g00181 Hean-Chr1:4597493 dispersed
Hean Hean-Chr1:4597493 Hean6g03198 Hean-Chr6:132057839 dispersed