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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00191 ATGACTACATCTAGATCGATGGTGTTATGGAAAGTTCCGACCTTTTTATTGTTGTGGACTCAAAGGGTCACGTTTACAAGTAATTATCTTGCACTGCTGGTAGGGCTTTTCAAGATATTGAAGGTTGGTACTTTCTTATTGCCATCTAAGCTGATCAGAAATCTGTGTTGTATATATGTGCGTATCGGAAGAATCAATAACATCTGTTTTTTTTTTCTGTTGGGTGTTGTACCATTCCCAAAAGACGTTTATCGGTTGAAGCAGCTTAACGTTGGTGGTGACGTCACTCTTAAAGAGCCGTATGAAACTCTGGTTCCCACTTCCTTTTATCAAGCTCATGACATAGACCATCATGTTATTCCTACGCGAGACATAGCCCATCCTGTTATTCCTACGCGAGACTACCTAAGTGAAGTGTTATTCCTACTTTGCGACCTGTCTTTAAAACTGTGTTTATCGTTCTTGACATTATATATATATATATATATATATATATATATATATATATATATATATATATAG 522 36.02 MTTSRSMVLWKVPTFLLLWTQRVTFTSNYLALLVGLFKILKVGTFLLPSKLIRNLCCIYVRIGRINNICFFFLLGVVPFPKDVYRLKQLNVGGDVTLKEPYETLVPTSFYQAHDIDHHVIPTRDIAHPVIPTRDYLSEVLFLLCDLSLKLCLSFLTLYIYIYIYIYIYIYIYI 173
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00191 173 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 64 144 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00191 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:4880861 Hean4g03057 Hean-Chr4:165704053 dispersed
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hean17g00813 ACH,WGDA 40 781 Protein tyrosine phosphatase (PTP) family AT3G55270 40.76 4.19e-166 494.0
Hean17g02068 . 1 30 Protein tyrosine phosphatase (PTP) family AT2G04550 76.667 4.59e-11 57.8
Hean16g00136 WGDA 44 912 Protein tyrosine phosphatase (PTP) family AT5G23720 63.11 0.0 1082.0
Hean16g00991 WGDA 17 215 Protein tyrosine phosphatase (PTP) family AT1G05000 72.5 2.43e-100 288.0
Hean16g01551 WGDA 1 653 Protein tyrosine phosphatase (PTP) family AT5G01290 64.234 0.0 859.0
Hean16g01862 . 21 307 Protein tyrosine phosphatase (PTP) family AT2G35320 56.552 1.78e-120 345.0
Hean16g02107 . 15 186 Protein tyrosine phosphatase (PTP) family AT3G02800 62.428 3.82e-81 238.0
Hean16g02586 WGDA 451 534 Protein tyrosine phosphatase (PTP) family AT3G01510 35.714 6.64e-06 45.4
Hean15g01167 . 19 396 Protein tyrosine phosphatase (PTP) family AT5G39400 58.311 6.47e-157 446.0
Hean14g02895 . 62 590 Protein tyrosine phosphatase (PTP) family AT3G01510 73.635 0.0 805.0
Hean14g03549 . 19 545 Protein tyrosine phosphatase (PTP) family AT3G10550 66.111 0.0 707.0
Hean14g03550 . 556 840 Protein tyrosine phosphatase (PTP) family AT3G10550 50.943 1.03e-105 325.0
Hean14g03551 ACH 559 840 Protein tyrosine phosphatase (PTP) family AT3G10550 53.793 2.72e-104 321.0
Hean14g03560 ACH 1 372 Protein tyrosine phosphatase (PTP) family AT3G52180 58.933 4.37e-155 439.0
Hean14g04112 . 11 282 Protein tyrosine phosphatase (PTP) family AT3G10940 71.636 6.02e-147 412.0
Hean13g00241 . 6 335 Protein tyrosine phosphatase (PTP) family AT1G71860 63.582 2.12e-149 423.0
Hean13g00242 . 36 335 Protein tyrosine phosphatase (PTP) family AT1G71860 60.714 1.20e-131 376.0
Hean13g02723 WGDA 265 326 Protein tyrosine phosphatase (PTP) family AT3G52180 40.625 4.56e-07 50.1
Hean13g03754 . 464 534 Protein tyrosine phosphatase (PTP) family AT3G01510 33.803 1.32e-06 43.9
Hean12g00592 . 21 195 Protein tyrosine phosphatase (PTP) family AT3G23610 54.286 7.55e-68 203.0
Hean12g01719 WGDA 10 840 Protein tyrosine phosphatase (PTP) family AT3G10550 65.182 0.0 1104.0
Hean12g02263 . 1 257 Protein tyrosine phosphatase (PTP) family AT2G04550 57.857 8.98e-106 306.0
Hean12g02681 . 69 227 Protein tyrosine phosphatase (PTP) family AT5G56610 48.75 4.89e-44 145.0
Hean12g02740 . 59 609 Protein tyrosine phosphatase (PTP) family AT3G19420 61.483 0.0 701.0
Hean12g03489 . 443 536 Protein tyrosine phosphatase (PTP) family AT3G01510 30.851 7.92e-07 43.5
Hean10g00535 . 1 653 Protein tyrosine phosphatase (PTP) family AT5G01290 54.222 0.0 703.0
Hean10g02777 . 1 257 Protein tyrosine phosphatase (PTP) family AT2G04550 56.989 2.08e-104 302.0
Hean10g03608 . 1 484 Protein tyrosine phosphatase (PTP) family AT5G58160 55.847 0.0 570.0
Hean9g00099 . 14 227 Protein tyrosine phosphatase (PTP) family AT5G56610 64.486 4.56e-98 285.0
Hean9g00493 . 995 1162 Protein tyrosine phosphatase (PTP) family AT5G58160 54.762 2.02e-50 171.0
Hean9g00772 ACH 812 1308 Protein tyrosine phosphatase (PTP) family AT5G58160 61.277 0.0 587.0
Hean9g00773 . 1 395 Protein tyrosine phosphatase (PTP) family AT5G58160 59.698 6.49e-176 523.0
Hean9g01452 ACH 1 378 Protein tyrosine phosphatase (PTP) family AT3G52180 57.441 3.13e-153 435.0
Hean9g04386 WGDA 14 912 Protein tyrosine phosphatase (PTP) family AT5G23720 62.939 0.0 1112.0
Hean9g04713 . 35 191 Protein tyrosine phosphatase (PTP) family AT3G23610 61.783 8.43e-65 196.0
Hean8g00098 ACH 64 462 Protein tyrosine phosphatase (PTP) family AT3G55270 55.639 1.24e-154 455.0
Hean8g01026 ACH,WGDA 13 840 Protein tyrosine phosphatase (PTP) family AT3G10550 64.782 0.0 1105.0
Hean8g01279 ACH 1 784 Protein tyrosine phosphatase (PTP) family AT3G55270 50.714 0.0 755.0
Hean7g00111 . 64 159 Protein tyrosine phosphatase (PTP) family AT3G01510 26.042 3.39e-07 50.1
Hean7g02663 ACH 1 473 Protein tyrosine phosphatase (PTP) family AT3G55270 68.815 0.0 669.0
Hean6g00049 . 21 337 Protein tyrosine phosphatase (PTP) family AT2G35680 52.553 1.65e-110 323.0
Hean6g01352 WGDA 38 462 Protein tyrosine phosphatase (PTP) family AT3G55270 55.14 2.09e-164 490.0
Hean6g02405 . 960 1285 Protein tyrosine phosphatase (PTP) family AT5G58160 57.382 7.06e-130 401.0
Hean6g02439 WGDA 1 653 Protein tyrosine phosphatase (PTP) family AT5G01290 63.343 0.0 838.0
Hean5g00943 . 969 1284 Protein tyrosine phosphatase (PTP) family AT5G58160 63.091 5.39e-129 399.0
Hean5g00951 . 1 398 Protein tyrosine phosphatase (PTP) family AT5G58160 51.485 4.31e-139 433.0
Hean5g03348 . 77 240 Protein tyrosine phosphatase (PTP) family AT2G35680 35.976 1.63e-22 89.7
Hean4g00686 . 459 536 Protein tyrosine phosphatase (PTP) family AT3G01510 36.709 3.70e-06 47.4
Hean4g02451 . 32 315 Protein tyrosine phosphatase (PTP) family AT2G35680 54.225 6.73e-102 299.0
Hean4g03057 . 76 214 Protein tyrosine phosphatase (PTP) family AT2G35680 56.028 6.74e-46 152.0
Hean4g04201 . 35 189 Protein tyrosine phosphatase (PTP) family AT3G23610 61.935 5.87e-66 199.0
Hean4g04383 WGDA 44 209 Protein tyrosine phosphatase (PTP) family AT1G05000 75.301 2.18e-95 275.0
Hean4g04565 . 27 611 Protein tyrosine phosphatase (PTP) family AT3G19420 64.957 0.0 782.0
Hean3g00101 . 34 217 Protein tyrosine phosphatase (PTP) family AT5G56610 72.581 4.69e-99 288.0
Hean3g01616 . 35 611 Protein tyrosine phosphatase (PTP) family AT3G19420 67.986 0.0 806.0
Hean3g02082 . 10 203 Protein tyrosine phosphatase (PTP) family AT1G05000 64.948 2.58e-90 261.0
Hean3g02084 . 10 203 Protein tyrosine phosphatase (PTP) family AT1G05000 64.948 2.58e-90 261.0
Hean3g02973 WGDA 265 326 Protein tyrosine phosphatase (PTP) family AT3G52180 40.625 5.37e-07 50.1
Hean3g04273 . 1 337 Protein tyrosine phosphatase (PTP) family AT2G35680 52.77 2.71e-117 339.0
Hean1g00190 . 153 196 Protein tyrosine phosphatase (PTP) family AT2G35680 61.364 6.64e-14 61.6
Hean1g00191 . 68 126 Protein tyrosine phosphatase (PTP) family AT5G56610 61.017 4.25e-19 79.3
Hean1g00940 . 66 186 Protein tyrosine phosphatase (PTP) family AT3G23610 39.669 4.69e-19 82.8
Hean1g02448 . 9 239 Protein tyrosine phosphatase (PTP) family AT3G44620 60.0 5.36e-96 279.0