Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Hean1g00198	ATGCCTCGGTATTATTGTGATTACTGCGATACTTACTTGACGCATGATTCTCCTTCTGTAAGGAAGCAGCACAATGCAGGATATAAACACAAGGCAAATGTTCGAATCTACTATCAACAATACGAGGCACAACAAAATCAATATCTGATTGACCAGAAAGTCAAAGAGCATCTTGGACAAGCTGCTGCATATCAGCAAGTTGGTGCTGCTTACAACCAACTCAGACCTCGTCTTCCTGTTCTACCTACTCCAATGATGCCGATTCCTGGGAATCCAATGATGCAAATGCCCGGAATGCGGCCACTCGCCCCGTTGCCAAGACCTATTACCGGATATCCCGGCATGCCTCCAATGTTGGCACCACCTGGCGCTCCTTCCATGCCCGGTCAGGTCAACCCATCCATGCCTGGTCAGGTCAACCCATCCTTACCCGGTCAGGTCAACAACGGTGTGCCAAGGCCTATAACCATTAGCGCCCCAATGATGGCGCCAGCCGCTCCAGGGAGCTCAGGAACCCTTACTTCAGGTGCACCACCGCCAATGTATACACCAGGCATGTATCAAGCCAGCCCCACAGCACCAGCACCGACGTCTGGAGGTTTTGAAAGTCCGAATGGTAGTGCCCAACCTCAGGAAGCTAACCATTAA	648	51.08	MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQYEAQQNQYLIDQKVKEHLGQAAAYQQVGAAYNQLRPRLPVLPTPMMPIPGNPMMQMPGMRPLAPLPRPITGYPGMPPMLAPPGAPSMPGQVNPSMPGQVNPSLPGQVNNGVPRPITISAPMMAPAAPGSSGTLTSGAPPPMYTPGMYQASPTAPAPTSGGFESPNGSAQPQEANH	215

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Hean1g00198	215	PIRSF	U1-C	1	215	IPR017340	GO:0000387(InterPro)\|GO:0000398(InterPro)\|GO:0005685(InterPro)
	Hean1g00198	215	Hamap	U1 small nuclear ribonucleoprotein C [SNRPC].	1	198	IPR017340	GO:0000387(InterPro)\|GO:0000398(InterPro)\|GO:0005685(InterPro)
	Hean1g00198	215	SMART	ZnF-U1-5	1	37	IPR003604	GO:0003676(InterPro)\|GO:0008270(InterPro)
	Hean1g00198	215	MobiDBLite	consensus disorder prediction	155	215	-	-
	Hean1g00198	215	MobiDBLite	consensus disorder prediction	190	215	-	-
	Hean1g00198	215	Pfam	U1 zinc finger	1	38	IPR013085	GO:0008270(InterPro)
	Hean1g00198	215	Gene3D	Classic Zinc Finger	1	60	-	-
	Hean1g00198	215	PANTHER	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C	1	203	IPR017340	GO:0000387(InterPro)\|GO:0000395(PANTHER)\|GO:0000398(InterPro)\|GO:0005685(PANTHER)\|GO:0005685(InterPro)\|GO:0030627(PANTHER)
	Hean1g00198	215	ProSiteProfiles	Zinc finger matrin-type profile.	4	36	IPR000690	GO:0003676(InterPro)\|GO:0005634(InterPro)\|GO:0008270(InterPro)
	Hean1g00198	215	FunFam	U1 small nuclear ribonucleoprotein C	1	61	-	-
	Hean1g00198	215	SUPERFAMILY	beta-beta-alpha zinc fingers	1	56	IPR036236	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Hean1g00198	K11095	U1 small nuclear ribonucleoprotein C

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Hean	Hean-Chr11:118157590	Hean1g00198	Hean-Chr1:5113976	dispersed