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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00210 ATGGAAGAAGGGACTGCAAACAATGCTGGAGCTTTACTAGTGGTTGGTAGAGGACTTGTGGTTGTTCCAAAACTGATTCACCCGTTGCCACCGCCACTTCACTCACCAGAAACATCTCCGGAACAGGTTCAAGATGATACGTGGATGCAGGAGCTTAATAATCAGAGACCACCAACTCCAACCAGGGGCCGATCCAAGCCTAACTATGACAGGAACTCACTTGCATATATATGA 234 47.44 MEEGTANNAGALLVVGRGLVVVPKLIHPLPPPLHSPETSPEQVQDDTWMQELNNQRPPTPTRGRSKPNYDRNSLAYI 77
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00210 77 PANTHER SERINE-THREONINE-PROTEIN PHOSPHATASE BSL3 4 77 - -
Hean1g00210 77 MobiDBLite consensus disorder prediction 38 68 - -
Hean1g00210 77 MobiDBLite consensus disorder prediction 28 77 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00210 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:5735083 Hean3g04006 Hean-Chr3:171320927 dispersed
Hean Hean-Chr1:5735083 Hean10g00572 Hean-Chr10:21278290 wgd
Hean Hean-Chr1:5735083 Hean11g02649 Hean-Chr11:119765645 wgd
Hean Hean-Chr1:5735083 Hean15g00296 Hean-Chr15:4569977 wgd
Hean Hean-Chr1:5735083 Hean4g03318 Hean-Chr4:176224069 wgd