Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean1g00223 | ATGACGAAAAAGCTCGTGAAATACTCCGTTGTGGATGCATTTACAGACACGCCGTTTAAAGGAAACCCAGCGGCTGTGTGTTTGTTAGATGACACTGAGAAAGATGATAAGTGGTTGCAATCAGTTGCAGCTGAATTTAACATCTCCGAGACTTGTTACTTGACTCCGGTTGCCGGTTCCAGATTTAATCTCAGATGGTTCACACCTGTAGCTGAGGTGGAGCTTTGTGGTCATGCAACTTTAGCAGCCTCCCACTTTCTTTTTAACTCTGGCTTGGTAAATTCTAACACAATCGAATTCTCAACACTTTCCGGAATTTTAACTGCCAAAAGAATCCCGGCTAACAAGATCAACGGCGAATCAGAAGATAGTTTCTACATAGAGTTAGATTTCCCTGTTGTGCCGGTTTCAGATTACAATGATCTTGAGGTTTCTGCAATTTCGGAAATACTAAACGGTGTTTCCGTTGTTGATGTGAAGACAAACACACTAGATGATATCTATGTGGAGCTTTCATCAGCGAAAGAACTGGTGGAGCTCAAGCCGCAAATTAATAAGATTAAAGCAGCCCCGGGTAGAGGGATAGTAATTACAGCGCGTGCGCCTGACGGGTCAGGGTTTGACTTTTATAGTCGCTTCTTCTGCCCGAAATACGGAATTGACGAGGATCCTGTTTGTGGGAGTGCACATTGCGCGTTAGCAGACTATTGGCATGAGAAGTTGGGGAAATGCGATTTTGTTGCATATCAGGCATCACCTAGGAGTGGCGTATTGCACGTCCATCTCGATAAGGAGAATCAAAGAGTACTTCTTCGAGGTAAAGCCACCACAGTCATGGAAGGATCTCTTTTGGTCTAA | 858 | 44.17 | MTKKLVKYSVVDAFTDTPFKGNPAAVCLLDDTEKDDKWLQSVAAEFNISETCYLTPVAGSRFNLRWFTPVAEVELCGHATLAASHFLFNSGLVNSNTIEFSTLSGILTAKRIPANKINGESEDSFYIELDFPVVPVSDYNDLEVSAISEILNGVSVVDVKTNTLDDIYVELSSAKELVELKPQINKIKAAPGRGIVITARAPDGSGFDFYSRFFCPKYGIDEDPVCGSAHCALADYWHEKLGKCDFVAYQASPRSGVLHVHLDKENQRVLLRGKATTVMEGSLLV | 285 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean1g00223 | 285 | PIRSF | Ismrse-PhzF | 4 | 285 | IPR003719 | GO:0003824(InterPro)|GO:0009058(InterPro) | |
| Hean1g00223 | 285 | PANTHER | PHENAZINE BIOSYNTHESIS PROTEIN | 6 | 285 | IPR003719 | GO:0003824(InterPro)|GO:0005737(PANTHER)|GO:0009058(InterPro)|GO:0016853(PANTHER) | |
| Hean1g00223 | 285 | Pfam | Phenazine biosynthesis-like protein | 11 | 281 | IPR003719 | GO:0003824(InterPro)|GO:0009058(InterPro) | |
| Hean1g00223 | 285 | NCBIfam | PhzF family phenazine biosynthesis isomerase | 8 | 283 | IPR003719 | GO:0003824(InterPro)|GO:0009058(InterPro) | |
| Hean1g00223 | 285 | Gene3D | Diaminopimelate Epimerase; Chain A, domain 1 | 10 | 281 | - | - | |
| Hean1g00223 | 285 | Gene3D | Diaminopimelate Epimerase; Chain A, domain 1 | 133 | 273 | - | - | |
| Hean1g00223 | 285 | SUPERFAMILY | Diaminopimelate epimerase-like | 7 | 284 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean1g00223 | K06998 | trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr1:6049010 | Hean1g00223 | Hean-Chr1:6058926 | dispersed | |
| Hean | Hean-Chr1:6058926 | Hean5g02872 | Hean-Chr5:155121292 | dispersed | |
| Hean | Hean-Chr1:6053357 | Hean1g00223 | Hean-Chr1:6058926 | tandem |