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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00225 ATGGCGACTCCTGATGTTTTCTCGTCCTCACATCTATTTGATCTTACCAAAGGTGATACTAAATCCAGAGGACTTGCCCTCGAGAAGAAAATTGAATATCTTGAGAGCTTGAACGACAGAGTTAGCAACAGGCGGGCACGTAGATGGATTAATGATCGTATACTGTTGGAGCTTGTACCTCGTTTGACTGGAGATGAAATTAGAGGCCTATTTGCTCCACCACCTTGGGGTGATGAGGCACGACCGTCACCATTTAGCATGACAAATGTCGGGGAGTGGGACAAATTTAGGAACATAGACATGGATAAAGAGGCTGGTGTGATCGAGGCCCTTAAAGGTTCCTCATCCAGGAAGAAAAGTCACGTGGATGCTGATAAGATAGCTGCGTTAACCGCTTGGCACAGGGTTGACTGCAAAACTAGAGACGCGTTTCGTAGAAGCTTCCTTCCGGAACTTGTTGATGGTTACGAGGAGAACGTACGGGCCTTTGTTTCAGAGGCAGGTGGCGAGGAGGTTCTTATACTACGTGTCCAAGACCCGTTCCATAGGTTGTTACTTCATGGTGTTTGTGAGTTCTACAATTTGGTCTCAACAACCGAATCAGAAACCAAAGGTACAAAGGTGTTGAAGATGACCAAGATCAAGAAGAAAAAAGCGGGTGATGACGAGCTCCCGACCATCACTCTTTGCCAGTTTCTCAAAATGGCAAAAGATGGGTTTTGGTAG 726 46.14 MATPDVFSSSHLFDLTKGDTKSRGLALEKKIEYLESLNDRVSNRRARRWINDRILLELVPRLTGDEIRGLFAPPPWGDEARPSPFSMTNVGEWDKFRNIDMDKEAGVIEALKGSSSRKKSHVDADKIAALTAWHRVDCKTRDAFRRSFLPELVDGYEENVRAFVSEAGGEEVLILRVQDPFHRLLLHGVCEFYNLVSTTESETKGTKVLKMTKIKKKKAGDDELPTITLCQFLKMAKDGFW 241
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00225 241 PANTHER R3H DOMAIN-CONTAINING PROTEIN 4 17 239 IPR039629 -
Hean1g00225 241 CDD R3H 153 207 - -
Hean1g00225 241 Pfam R3H-associated N-terminal domain 27 146 IPR025952 -
Hean1g00225 241 SUPERFAMILY R3H domain 133 212 IPR036867 GO:0003676(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00225 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
402290 Hean11g02671 Hean1g00225
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr11:122246235 Hean1g00225 Hean-Chr1:6079667 dispersed
Hean Hean-Chr1:6079667 Hean9g03236 Hean-Chr9:154818755 dispersed
Hean Hean-Chr1:6065375 Hean1g00225 Hean-Chr1:6079667 tandem