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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00227 ATGAAAAAGTTGAAGGGGTGCCTCTACACAACCTCTGAGTCGAACACTAAGTTGCCTGACCTTGGTCCTGACTTAATAATGTCAGAGATACTGCCAAGACTTCCTGCAAAATGTGTAGGTCGTGCAAAGAAGGTATGTAAAGAATGGTTGTCATGTATATCGTCGAAGGAGTTTGTCATGATGCACTGTAGACATATGTGTAAGGGGTCTAGACAAAAAATTCTTAGTATTGGACATGAATCATGCTTTATTTCCAGCACGGGTGTTGATTTAGTCGATGAGAAAACCATGATTACCTACCGTTTCATGTTCGCCCTTCTGATGTGTGGATTTTATCAAGCTTGA 345 40.87 MKKLKGCLYTTSESNTKLPDLGPDLIMSEILPRLPAKCVGRAKKVCKEWLSCISSKEFVMMHCRHMCKGSRQKILSIGHESCFISSTGVDLVDEKTMITYRFMFALLMCGFYQA 114
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00227 114 Pfam F-box domain 23 58 IPR001810 GO:0005515(InterPro)
Hean1g00227 114 SUPERFAMILY F-box domain 18 71 IPR036047 GO:0005515(InterPro)
Hean1g00227 114 Gene3D - 15 109 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00227 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:6148275 Hean4g00864 Hean-Chr4:24069718 dispersed
Hean Hean-Chr1:6084811 Hean1g00227 Hean-Chr1:6148275 tandem