AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean1g00244 | ATGGGCGGTGGCAACATGCCTGCATTCGTGGTGCGAGCCGTGGCTGCTGCTGTCAGTGGAATTATCGCATTCACCATGCTTCCTTTACCATCACCAGACCTGTCACTGCTTACTCCGTATGTGCAACTACATGGTGTACCCCACCAATGGGCATCCTTCATTTGGCTTTGCGATCCTTTATCCTGCTTGGTTGTCCAACCTATTTTTGGATACTATAGCGACCGATGCACCTCCTGCTTCGGCCGCCGTCGTCCCTTCATCGTCGGCGGAGCGTTACTGGTCCCCATCATTGTATTCTTAATCGGATACGAGGCTGACATTGGCATCTCTACTGGTGATAAAATTGGCGCACCAAGGAAGCCGCGTGCCATTGCAGTTTTCGTGTTTGGGTTCTGGATCCTGGACGTAGCCAACAAAATGTTGCAGGGCCCCTGCAGAGCGCTCCTGGCAGACCTAGCCAGTTCGAATTCCACCAAAATTCGAGCTGGGAACACGTTGTTCGCCTTCTTCATGGCTGTAGGGAACGTGCTGGGATACTCAGCCGGGTCCTACACCCATCTGTACAGGATTGCCCCCTTTACTAAAACTGATGCATGTGACATCTTCTGTGCGAATCTAAAAACATGTTTTTTCATCTCAGTCGCGCTTTTGATAAGCATCATGTTGCTGGCTGTTTGGGCCGTTTCAGAAGATCCCTATGTACCAGAGGCGGCGGTTGAGAACGGTGCGACTGGGAAACAACATATGGTTGGGGCCTTAAAAGAATTGTCAAAGCCCATGTTGATTTTACTGCTGGTCACTTTCTTCAACTGGCTGGCATGGTTTCCGTTTTTGTTATTTGACACGGACTGGATGGGAAAAGATATATATGGAGGGAAGCTGGGTGCACAGCTGTACAACCGAGATGTTCGTGCCGAGGCACTGGGTTTGATGTTAAACTCGGTCATGTCGGGTCTGGCGTCACTCTGCATTGAGCGTTTGGCTCGGTGGGTTGGTGGTGTAAAGCGGCTCTGGGGTGGTATGAATTTTCTGTTGGCGGTATGTCTGGCGTTGACATTGGTTGTGACACACATGGCTAGGTCCGAGCCAGAGTTTAATAAGGCGACACCTAAGCCTGGTGTCGTCGGCTTAACTTTGGCTACATTTGCCGTTCTTGGTGCCCCGCTCGCAGTGACTTTCAATGTTCCATGCGCTCTGGCTTCTATATTCTATAACAACTCTCGAGCTGGACAAGATTGTGGTCTCCTTGCTGAGCGGGTCGGGTGTTCAAGATCGGATTATCCGGTTTTCAGATATCCGAAAACCGGATATCCGAAAATTTCGGATAGTGAATATTGA | 1338 | 50.22 | MGGGNMPAFVVRAVAAAVSGIIAFTMLPLPSPDLSLLTPYVQLHGVPHQWASFIWLCDPLSCLVVQPIFGYYSDRCTSCFGRRRPFIVGGALLVPIIVFLIGYEADIGISTGDKIGAPRKPRAIAVFVFGFWILDVANKMLQGPCRALLADLASSNSTKIRAGNTLFAFFMAVGNVLGYSAGSYTHLYRIAPFTKTDACDIFCANLKTCFFISVALLISIMLLAVWAVSEDPYVPEAAVENGATGKQHMVGALKELSKPMLILLLVTFFNWLAWFPFLLFDTDWMGKDIYGGKLGAQLYNRDVRAEALGLMLNSVMSGLASLCIERLARWVGGVKRLWGGMNFLLAVCLALTLVVTHMARSEPEFNKATPKPGVVGLTLATFAVLGAPLAVTFNVPCALASIFYNNSRAGQDCGLLAERVGCSRSDYPVFRYPKTGYPKISDSEY | 445 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean1g00244 | 445 | Pfam | MFS-sugar transport protein | 39 | 400 | - | - | |
| Hean1g00244 | 445 | Gene3D | MFS general substrate transporter like domains | 8 | 234 | IPR036259 | - | |
| Hean1g00244 | 445 | SUPERFAMILY | MFS general substrate transporter | 35 | 414 | IPR036259 | - | |
| Hean1g00244 | 445 | PANTHER | SUGAR TRANSPORTER | 33 | 416 | - | GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0008506(PANTHER)|GO:0016020(PANTHER) | |
| Hean1g00244 | 445 | NCBIfam | sucrose-proton symporter | 33 | 412 | IPR005989 | GO:0005886(InterPro)|GO:0008515(InterPro)|GO:0015770(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean1g00244 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr1:6366062 | Hean4g01633 | Hean-Chr4:60864885 | dispersed | |
| Hean | Hean-Chr1:6366062 | Hean1g00245 | Hean-Chr1:6368301 | tandem |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Hean17g01559 | . | 3 | 594 | Sucrose Transporter gene family | AT2G02860 | 67.763 | 0.0 | 828.0 | |
| Hean11g00512 | . | 420 | 501 | Sucrose Transporter gene family | AT1G22710 | 68.293 | 2.85e-32 | 115.0 | |
| Hean11g00513 | . | 28 | 418 | Sucrose Transporter gene family | AT1G66570 | 60.199 | 0.0 | 516.0 | |
| Hean9g02567 | . | 16 | 508 | Sucrose Transporter gene family | AT1G71890 | 63.911 | 0.0 | 629.0 | |
| Hean9g02574 | . | 16 | 508 | Sucrose Transporter gene family | AT1G71890 | 62.702 | 0.0 | 620.0 | |
| Hean8g03410 | . | 307 | 512 | Sucrose Transporter gene family | AT1G71890 | 37.379 | 1.43e-33 | 122.0 | |
| Hean8g03411 | . | 304 | 392 | Sucrose Transporter gene family | AT1G22710 | 46.739 | 4.78e-16 | 72.8 | |
| Hean8g03412 | . | 368 | 512 | Sucrose Transporter gene family | AT1G71890 | 36.301 | 1.81e-16 | 72.4 | |
| Hean8g03413 | . | 282 | 512 | Sucrose Transporter gene family | AT1G71890 | 38.362 | 6.39e-39 | 137.0 | |
| Hean5g01419 | . | 3 | 594 | Sucrose Transporter gene family | AT2G02860 | 65.512 | 0.0 | 776.0 | |
| Hean4g00198 | . | 60 | 594 | Sucrose Transporter gene family | AT2G02860 | 72.477 | 0.0 | 801.0 | |
| Hean4g01633 | WGDA | 16 | 510 | Sucrose Transporter gene family | AT1G22710 | 66.335 | 0.0 | 671.0 | |
| Hean2g01546 | WGDA | 14 | 501 | Sucrose Transporter gene family | AT1G22710 | 63.158 | 0.0 | 616.0 | |
| Hean2g01843 | . | 18 | 505 | Sucrose Transporter gene family | AT1G09960 | 67.623 | 0.0 | 651.0 | |
| Hean1g00244 | . | 49 | 444 | Sucrose Transporter gene family | AT1G22710 | 57.323 | 9.67e-159 | 457.0 | |
| Hean1g00245 | . | 157 | 444 | Sucrose Transporter gene family | AT1G22710 | 54.861 | 1.48e-104 | 313.0 | |
| Hean1g00246 | . | 35 | 147 | Sucrose Transporter gene family | AT1G22710 | 69.912 | 1.16e-52 | 171.0 | |
| Hean1g00247 | . | 157 | 501 | Sucrose Transporter gene family | AT1G22710 | 47.449 | 2.16e-110 | 331.0 | |
| Hean1g00248 | . | 35 | 147 | Sucrose Transporter gene family | AT1G22710 | 69.027 | 1.92e-50 | 164.0 | |
| Hean1g00249 | . | 157 | 501 | Sucrose Transporter gene family | AT1G22710 | 49.593 | 2.31e-112 | 335.0 | |
| Hean1g00250 | . | 35 | 147 | Sucrose Transporter gene family | AT1G22710 | 70.796 | 1.92e-52 | 170.0 | |
| Hean1g00251 | . | 367 | 444 | Sucrose Transporter gene family | AT1G22710 | 51.282 | 2.18e-15 | 68.6 | |
| Hean1g00252 | . | 157 | 298 | Sucrose Transporter gene family | AT1G22710 | 49.296 | 1.88e-46 | 155.0 | |
| Hean1g00253 | . | 35 | 147 | Sucrose Transporter gene family | AT1G22710 | 75.221 | 3.37e-57 | 182.0 |