AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00255 ATGGATTTCTTCAGATCTATATTATCAGATGATCCAGAACCTGAATCTCCACACAATCACTCACAATCCGATTCAAATCCGATCCAAAATCACTCACCAAATCATTCAGAAACCGAAGCTGATGAAGAAGACGAAGATTCCACTTCAAATCTCAATTCATCCGACGACGGCAGCGGTGGAGCTAGCAGCGGTGGTGGCGGTGGCGGTTTATGGAGCTTAGGAGATCTAGTGAAAACGTTAACTACGAAATCGGAGTCAGTTTTCGAAACCTACCGGCGAGATCTGCAGGAATTCGGTACTGGATTGAGGAAGGAATCGGATCTGTTCCGTGAAGTTGCGAGCCGTGCGGTGAAGGAGTTACCGGCGTCGATCGACGTCGGAACGTCGGCGATTGACGGAGTGTTGAAATCAACGGCGGAGATTATCGCACAAGGTAAGGAAGTTTTACTTGCGTCTTCTGATGTTGATGAATCTGATAGTTCTGATAGGTATAATAATAGTGAACGTAGTGGTGTGGATTTGAATAATTCGGTTAGGTATAGTCGGTTTGATGCTCAATTGAATGCTATTAGGAGTGATGTGAGAGTGTTTGTTGAGGATCCTGAGGATGTAGAGGACTATAATAAGTGGAAGTTAGGGTTTGTGGTTGGAGATAAGAAGGATGAGATTGAGGAATTGATCGGAGAGAATGGCGGTTTGGAGGAAGTTTATGCGAAACTTGTGCCGAATGAGGTTGATGATGGAACGTTTTGGTTTAGGTATTATTATAAGGTGTATAAGCTTACATTGCAAGAGGAAATGAGAGCTAAGCTTGTGAAGCGATCGTTGTCGGTTGATGATGAAGAAGAATTGAGTTGGGATGTTGATGATGATGATGAAGAAGAAGAAGAACCACAGCAACATCATAAATTAGAACCAGCTGATTCGGAAGACGGTAGAAAGAAACAGAGCACTGATGACAAAATCGAAACTAAAAGTTCTAAGATTGTTGATGAAGATAAGGAGATGATAATCAATGTGGTTAGTGTTGATAAGAACAGTGTAGAGGAACCGAAGCTCACTAGTGAAATTAAAACTCATGTTGAGGAAGCTGAGTCGGTGCCAAAATCTGGTGAAACAGTTGACGTCAAACCGGATTCGGGTGAAGCGAAAGATAGTAATGTCATGGTTAAATCAAGCGAGCCTTCATTTCAAGAGGATGAGGATCTCGAGTGGGATGAGATCGGAGATCTTGGGAAAACTGATGACAAGAATGTAATTCATGGTGACACAACAACAAACAAAGCCGATCTGCGCAAGCGATTGAGTACTGTTGCGGATGAGGATGAGGATTTGAGTTGGGATATTGAAGACGATGACGAGCCTGTAAAGTCAGGTAATAAGTGA 1386 42.86 MDFFRSILSDDPEPESPHNHSQSDSNPIQNHSPNHSETEADEEDEDSTSNLNSSDDGSGGASSGGGGGGLWSLGDLVKTLTTKSESVFETYRRDLQEFGTGLRKESDLFREVASRAVKELPASIDVGTSAIDGVLKSTAEIIAQGKEVLLASSDVDESDSSDRYNNSERSGVDLNNSVRYSRFDAQLNAIRSDVRVFVEDPEDVEDYNKWKLGFVVGDKKDEIEELIGENGGLEEVYAKLVPNEVDDGTFWFRYYYKVYKLTLQEEMRAKLVKRSLSVDDEEELSWDVDDDDEEEEEPQQHHKLEPADSEDGRKKQSTDDKIETKSSKIVDEDKEMIINVVSVDKNSVEEPKLTSEIKTHVEEAESVPKSGETVDVKPDSGEAKDSNVMVKSSEPSFQEDEDLEWDEIGDLGKTDDKNVIHGDTTTNKADLRKRLSTVADEDEDLSWDIEDDDEPVKSGNK 461
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00255 461 MobiDBLite consensus disorder prediction 282 329 - -
Hean1g00255 461 SUPERFAMILY BSD domain-like 179 268 IPR035925 -
Hean1g00255 461 ProSiteProfiles BSD domain profile. 210 262 IPR005607 -
Hean1g00255 461 PANTHER SYNAPSE-ASSOCIATED PROTEIN 32 448 IPR051494 GO:0005737(PANTHER)
Hean1g00255 461 MobiDBLite consensus disorder prediction 19 34 - -
Hean1g00255 461 MobiDBLite consensus disorder prediction 1 69 - -
Hean1g00255 461 MobiDBLite consensus disorder prediction 348 461 - -
Hean1g00255 461 SMART wurzfinal6 210 262 IPR005607 -
Hean1g00255 461 MobiDBLite consensus disorder prediction 349 384 - -
Hean1g00255 461 Gene3D BSD domain 173 273 IPR035925 -
Hean1g00255 461 MobiDBLite consensus disorder prediction 282 296 - -
Hean1g00255 461 Pfam BSD domain 210 266 IPR005607 -
Hean1g00255 461 MobiDBLite consensus disorder prediction 297 329 - -
Hean1g00255 461 MobiDBLite consensus disorder prediction 410 441 - -
Hean1g00255 461 MobiDBLite consensus disorder prediction 1 18 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00255 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr15:4753792 Hean1g00255 Hean-Chr1:6629318 dispersed
Hean Hean-Chr17:12686409 Hean1g00255 Hean-Chr1:6629318 dispersed