AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00258 ATGCTCAACATTTTCAACAAAAACCTCCGGCGACTCTGCTCAAAGCTCCGGTGGCCGGTGCGCCGCCGTTCAAAGCCTAAAGTTATCATCAAAAGATTCGGAAGATCAAATTCTAGAAATCAAGATTCACTAAACTCAAATGGGTCAGCCACAATTCACCCAAATAACCATTTGGGTATCCCAAAATCACAAAATCCAATCAGAATTGCAACTTTTAATGCTGCTTTGTTCTCCATGGCTCCTGCAGTCCCAGAGTTGACCAAAAAAGGTCAAAGCTTTGACCTTTTAGAAGATGATCAACATAATCAAGATGACCCAAAGGTAGTTTTTAATTCTACAGTGTCTTATGTTAATTCAAGGTCAAAATCTATGGTTGATAGGCCTAAAAGTATATTAAAGCAATCACCTTTACATTCAAGTTCAATGAGTAGTTCAGAAATGTTGACTAAACAGCAGAAATTTGCAAAGTCAAAGTTAAGGGTATCGATTAATTTACCGGATAATGAGATCTCGTTGAAGCGAAGCGGGCAGTTGAGCTTTGTTACGGACGAAAATGAACCCGACCCGGATTCGAAAAGTGGTGGTTCCAAGGGTATAAGTAGGATTTTGAAAGGAAAAGGTGTTTTGAGATCACAGAATAGTTTTTCTGCAAGAGAGTTTGAAAGTCAAAGGGGGAGTTATAGGTCAACCAAGACTGTTGTTGAGGTTTTGAGAGAATTGGATGCTGATATTTTGGCTTTACAAGATGTGAAAGCTGAAGAGGAAAAAGATATGAAACCTTTATCTGATTTGGCTGCTGCTTTGGGTATGAATTATGTTTTTGCTGAGAGTTGGGCACCCGAATATGGTAACGCGGTTTTGTCAAAATGGCCGATTAAAAGATCGAAAGTTCAGAAGATTTTCGATGATTCGGATTTCAGGAACGTTTTAAAGGCGACAATTGATGTTCCACAAACCGGAGAAGTTGATTTTCATTGTACCCTTCTTGATCATCTTGATGAAAATTGGCGAATGAAGCAAATAAATGCAATCATCGAATCTAATGAGAGACCACACATCTTAGCCGGAGGTATCAACTCTCTTGATGAAACAGACTATTCGTCCGAAAGATGGACCGACATTGTTAAGTACTATGAAGAAATGGGAAAACCGACACCAAAAGTTGAAGTGATGAAGTACTTAAAGAGCAAACAGTACACCGATGCTAAGGATTTTGCAGGCGAATGTGAATCTGTAGTCATTATCGCTAAAGGCCAAAATGTGCAGGGTACATGCAAATACGGTACTAGAGTAGATTATATATTGGTGTCACCCGATTCACCTTACAAGTTTGTTCCCGGATCATATATGGTTTTATCATCTAAAGGAACTTCTGACCATCACATAGTCAAAGTTGAAGTAACAAAGGTAGATGAACCGATTCAACAACCGTACGTTAGAAGACATCGACATCCTAAACAAAAAGTTGTGAAGATAACAAATTCTAATTCATCAAAAGGGGCATGGAAAATGCAAACTTTAGATAGATAG 1530 38.69 MLNIFNKNLRRLCSKLRWPVRRRSKPKVIIKRFGRSNSRNQDSLNSNGSATIHPNNHLGIPKSQNPIRIATFNAALFSMAPAVPELTKKGQSFDLLEDDQHNQDDPKVVFNSTVSYVNSRSKSMVDRPKSILKQSPLHSSSMSSSEMLTKQQKFAKSKLRVSINLPDNEISLKRSGQLSFVTDENEPDPDSKSGGSKGISRILKGKGVLRSQNSFSAREFESQRGSYRSTKTVVEVLRELDADILALQDVKAEEEKDMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWPIKRSKVQKIFDDSDFRNVLKATIDVPQTGEVDFHCTLLDHLDENWRMKQINAIIESNERPHILAGGINSLDETDYSSERWTDIVKYYEEMGKPTPKVEVMKYLKSKQYTDAKDFAGECESVVIIAKGQNVQGTCKYGTRVDYILVSPDSPYKFVPGSYMVLSSKGTSDHHIVKVEVTKVDEPIQQPYVRRHRHPKQKVVKITNSNSSKGAWKMQTLDR 509
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00258 509 Gene3D Endonuclease-exonuclease-phosphatase 213 469 IPR036691 -
Hean1g00258 509 MobiDBLite consensus disorder prediction 125 149 - -
Hean1g00258 509 MobiDBLite consensus disorder prediction 133 149 - -
Hean1g00258 509 FunFam Endonuclease-exonuclease-phosphatase family protein 218 470 - -
Hean1g00258 509 SUPERFAMILY DNase I-like 230 467 IPR036691 -
Hean1g00258 509 MobiDBLite consensus disorder prediction 33 59 - -
Hean1g00258 509 Coils Coil 237 257 - -
Hean1g00258 509 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 16 466 IPR051916 GO:0005783(PANTHER)|GO:0006506(PANTHER)
Hean1g00258 509 MobiDBLite consensus disorder prediction 176 200 - -
Hean1g00258 509 Pfam Endonuclease-Exonuclease-phosphatase family 224 460 IPR005135 GO:0003824(InterPro)
Hean1g00258 509 MobiDBLite consensus disorder prediction 34 59 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00258 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
402295 Hean11g02689 Hean1g00258
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr3:148639024 Hean1g00258 Hean-Chr1:6688653 transposed
Hean Hean-Chr1:6688653 Hean11g02689 Hean-Chr11:123447515 wgd