Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean1g00281 | ATGCAGTTTTGGTTCAAAGCTTCGGGTTTCGGTTCGGTCAACAACAATCAACTGGTGGTTTGGTTCAGATTACGGTTTGGATCAGTTTCGGGTGATTCGGGTTCGCGACACGGTCAAAGTCAGTCAACGAAAGCCAACTGGTCAACCCCAGTCAACTTTTGGGTCAAACTTAGTCGACGAAAGACCCGTAGGAAGAATGCTTCTTCTGGAATGGGTGTTGCTGATCACTGTAAAGGCACCTTCTTGGAACTACAAAGAAAGAAGGCACACCGTTACGTGATTTTCGAAATTGACAAAAAGAAAACTCAAGTTGTTGTGGAGAAGACTGGCAATCCTGCTGAAAGTTACGATGATTTTACATCGGCTTTGCCCGAAAATGATTGCAGATACGCAATCTTTGACTTTGTAACCTCTGAGAACTGTCAAAAGAGCAAGATTTTCTTCATCGCATGGTTAGTTTTCTCTTTTTCCTATATGATCCATTTGCATACCTTAAGAAAAAAATTCTATGTAGTTAATGCCGCAGATATATAG | 534 | 41.57 | MQFWFKASGFGSVNNNQLVVWFRLRFGSVSGDSGSRHGQSQSTKANWSTPVNFWVKLSRRKTRRKNASSGMGVADHCKGTFLELQRKKAHRYVIFEIDKKKTQVVVEKTGNPAESYDDFTSALPENDCRYAIFDFVTSENCQKSKIFFIAWLVFSFSYMIHLHTLRKKFYVVNAADI | 177 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean1g00281 | 177 | Pfam | Cofilin-tropomyosin-type actin-binding protein | 77 | 151 | IPR002108 | GO:0003779(InterPro) | |
| Hean1g00281 | 177 | ProSiteProfiles | ADF-H domain profile. | 70 | 177 | IPR002108 | GO:0003779(InterPro) | |
| Hean1g00281 | 177 | PANTHER | COFILIN-RELATED | 66 | 152 | IPR017904 | GO:0005737(PANTHER)|GO:0015629(PANTHER)|GO:0015629(InterPro)|GO:0030042(PANTHER)|GO:0030042(InterPro)|GO:0051015(PANTHER) | |
| Hean1g00281 | 177 | SMART | adf-2 | 75 | 176 | IPR002108 | GO:0003779(InterPro) | |
| Hean1g00281 | 177 | CDD | ADF-cofilin-like | 69 | 151 | IPR017904 | GO:0015629(InterPro)|GO:0030042(InterPro) | |
| Hean1g00281 | 177 | Gene3D | Severin | 66 | 160 | IPR029006 | - | |
| Hean1g00281 | 177 | SUPERFAMILY | Actin depolymerizing proteins | 66 | 152 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean1g00281 | K05765 | cofilin |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr13:170471851 | Hean1g00281 | Hean-Chr1:7287948 | dispersed | |
| Hean | Hean-Chr15:87912037 | Hean1g00281 | Hean-Chr1:7287948 | dispersed | |
| Hean | Hean-Chr1:7287948 | Hean5g00431 | Hean-Chr5:12364620 | dispersed | |
| Hean | Hean-Chr1:7287948 | Hean10g00373 | Hean-Chr10:12280483 | transposed |