AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00282 ATGAAGTCATCCAATAAACACCTTTCTAAAAAATTGTGTAGCCTAGGGACCAATCTAGACCTACACGTACACATTCCCACTCCCACGTGTCACTCTCTCTTTCTCTCTCTCTCTAAACCTCCAATGGATTCCAATTCCATGGCGAAACGCCCCAAACCTCCGTCAGATCACTTCAACATGGACGCTCTGTTAACCTCCTTCTTATCTCTATCCGATTCGCCGTCGATCCACACCTCTTTCGACCGCCTTATTCAATCAACCGCCTCCGATTCCGATCAAAACCGGTTGATTCAACGCGCTCTGCGTCTCGGTTCGCTTTTACTTGATGCTGCTAATCGATCTGCTCGCAGATGCTCTTCCGATCATAACGCCGTCGTTTGGCCGCTCTCGCCGGACCTCACTATCAAGATTTTTTCAATGCTTGATACACAAAGTGTATGTTATGTTGCGGCTACATGCTCGTTTTTTCAGAAGTGTGCAATGGATCCTTCGTGTTTTGCTAACATTGACTTGGCTACATTAGTCCCTAAAGTCAACAATGCTGTGGTGTCGACGATGATCCATCGAGCTGGAGATGCGCTTAAGTCTATAAGGCTTGGTGTATTACCAATCGTTCCTGCTCCACCTTTCTTTTCATCTCAACCGTTGGTTTATAGCATTAGAAACGCAAATGACGCATCAGGATTTTCATGGAATGACAAAAAGTCAAGGCAGGGAAAGGAATCTTCCATTCTAACAAGGTCCTGTCTGAATTCTTTGAGTGGCAATGGTGGTGCACCTGGGTATGGGGTTCATTTGAGAAGATTACACCTATACAACATTGAAAGAATGGACAATGCATCCCTCTTGACATCATTATCAGCTTGTCCATCTCTCGTTGATCTAGAAATTGTGGGCCTGCATGTTGAATTGAGGCATACATTGGAGTCAATAAGTAGAAACTGTCCGTTGATAGAACGTTTGGTTTTCGAATCATCAAAAACAGGTAGAGATGATGGTTTGAAATTCCCGACCTGTAATGAATTTGTCCACAACTGTCCTAACATAACCACCTTAGCACTAAAAGGATTTAAGCTACATGACTACAAGGCTCGTATGCTGGTAAAGGGTTTACGAAGATTGAAACATCTTGATCTTTCAACGTCTTACTCATTCACCGGTGCATTTTTAAAGAATGTTAGTGGCAATGGCGGTGGCGGTGGTGATAACTTAGAGGTGATGATCTTACGGGACTGTATGCATCTAAAGGAAATTGAAGTCGAGCGGTTTATGGCAGCTGTTCTTGCAGGGGAATTCAAGCTCCTTAGACATCTTGATATATCTAACAGGGAAGGTCTAGCGTGTGAGGGTGACTGGAGCAATAGATGTTACAATGCTAGCTTTATTCCTATACAGCAATTATTGGAACAGAGGCCTGATTTTTGTTTGGTTGCTGAATTCCCGAAAGGAAGTTACAATGACAATGATCAAATGATAGGCAGTGACGTAAGTTTAGCATCGCAGTCGAGCAGTAGCCATACATCTGACGGATCAAGCACGTCAGACGGGAGTTATAATAGTGATCATGGTAGTGGTAACGAGTACGGTAGAGAAAGTGTTTTCACAATCTACGAAGAAAACTCAGACTACCTCATGAGTTGA 1641 43.45 MKSSNKHLSKKLCSLGTNLDLHVHIPTPTCHSLFLSLSKPPMDSNSMAKRPKPPSDHFNMDALLTSFLSLSDSPSIHTSFDRLIQSTASDSDQNRLIQRALRLGSLLLDAANRSARRCSSDHNAVVWPLSPDLTIKIFSMLDTQSVCYVAATCSFFQKCAMDPSCFANIDLATLVPKVNNAVVSTMIHRAGDALKSIRLGVLPIVPAPPFFSSQPLVYSIRNANDASGFSWNDKKSRQGKESSILTRSCLNSLSGNGGAPGYGVHLRRLHLYNIERMDNASLLTSLSACPSLVDLEIVGLHVELRHTLESISRNCPLIERLVFESSKTGRDDGLKFPTCNEFVHNCPNITTLALKGFKLHDYKARMLVKGLRRLKHLDLSTSYSFTGAFLKNVSGNGGGGGDNLEVMILRDCMHLKEIEVERFMAAVLAGEFKLLRHLDISNREGLACEGDWSNRCYNASFIPIQQLLEQRPDFCLVAEFPKGSYNDNDQMIGSDVSLASQSSSSHTSDGSSTSDGSYNSDHGSGNEYGRESVFTIYEENSDYLMS 546
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00282 546 PANTHER F-BOX-TPR REPEAT PROTEIN POF3 127 481 - GO:0019005(PANTHER)|GO:0031146(PANTHER)
Hean1g00282 546 MobiDBLite consensus disorder prediction 496 526 - -
Hean1g00282 546 MobiDBLite consensus disorder prediction 496 531 - -
Hean1g00282 546 SUPERFAMILY RNI-like 262 443 - -
Hean1g00282 546 Gene3D Ribonuclease Inhibitor 125 453 IPR032675 -
Hean1g00282 546 SUPERFAMILY F-box domain 122 172 IPR036047 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00282 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
102348 Hean15g00353 Hean1g00282
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr15:5864049 Hean1g00282 Hean-Chr1:7289961 dispersed
Hean Hean-Chr1:7289961 Hean3g01557 Hean-Chr3:93553932 dispersed