AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00285 ATGGGATACCCTGCTTCCACCGTTAACCACCCCGACCGACGGCGTCGCAACCGTAACGACTCACCGGAACCTTCTCCTCCACCCGACCGTCGCAACCGCAGCTCCCGTCGCTCTCCAGAACATTCCAGGTACGATCACGATCTCAATCGTTCACGTAACCGTCGTTCACCTGATTATCCTAAATCAACTCATCAAACTCGTAGTATTAGCCGTAGTCGTAGTCCGGATTATAGCCGTTACGATAATCAAACTAGCTATCGCCGTAATCACCGTTCGCCTGAAAACTCTAGGTTTAGAACAAGCCCTAACCCTAGGGTTCATGTAGATCCGAATAGGAAGGTGAACTATGGAGAACGGAATAAACAGTATCTGGATCGTGACCGTGGTGGTTATCGTAACGGTAACGGTGATGGACCGGAGTCTGAGTCGGATGAGGAGTTGAAAGGATTGAGTTATGAAGAGTATAGGAGGTTGAAAAGGCAGAAAATTAGGAAGATGTTGAGGAATTGTATATGGAATGTTACACCGAGTCCTCCGAGGGGGGATAATGAGTTTGATGAGGATGAACCGGAGGAGGTTGTGGAAGAAAAGGATGAGTTGGATTTGAAGGCGAAGGGCGGTGGTTCGTCGGAGTCTGATTCGGAGTCGGAGTCAGGATCGGATGACTCGGTTTCTGATTCGGATGATTCTAGGTCGAGGAGGAGGAGGAAGAAGAAGAGTTCTAGGTCTAGGCGTAGGAGAAAGAGATCTGTTTCTGTGAGCGACAGTGAGTCGGATGATTCTGAAGAAGAAGACAGACGGAAGAAGAAGAATTCGAGGTCTAGGGCTAGAAGAAAGAAATCGGTATCCGTGAGTGAGAGTGAGTCGGACTATTCGACTGATGATTCTGAAGAAGAAAGGAGGAAGAAGAAGAAGTCGAAGAGATCTACCAAACGAAAGAGTAGCAGTAGGAAAACTAGTAAGAGAAAGAGAAGAAGTAGTTCAAGAAAAGGTACAGATAGCGATTCTGAAGAAAGTAGCGAGAGTGATAGAAGCAAGTCCAAAAGAAGCCACCGATCTTCCTCAAAATCAAGCAAGAAAAGGAGTGAAAAAGGTAGTGAGAGTTCAGCATCAGACGATAATTCAGATTCTGCAAATGAAAACAAAAGTAAACCAAAGGCGGATGATTTGGAGAAAACAGAAAACGATAGTGAGATGCTCATGTTTAAAGAAATGATGGAGTCAAAAAAGAAGCTTGCATTGGATGATGAACCAGAGGTGGGACCGATGCCGTTACCAAGAGCTGAAGGGCATATTAGCTATGGTGGTGCATTGAGGCCCGGTGAAGGTGATGCTATTGCACAGTACGTGCAGCAAGGGAAACGTATTCCTCGTAGAGGAGAAGTTGGTCTTTCGGCTGATGAGATTAGCAAGTTTGAAGATCTTGGTTATGTTATGAGTGGTAGTAGGCATCAAAGAATGAACGCAATTCGTATTAGGAAAGAAAATCAAGTCTATAGTGCTGAGGATAAGCGGGCTTTAGCCATGTTTAACTATGAAGAAAAAGCAAAGCGTGAACAGAAAGTCATGGCTGACTTGCAGCGGTTGGTACAACGTCACATTGGAGAAGAGACAGGCCCTTCTCATGATCCGTTTGGTGGAAAAGCAACGGAGGACCCTGATGCTTGA 1668 45.8 MGYPASTVNHPDRRRRNRNDSPEPSPPPDRRNRSSRRSPEHSRYDHDLNRSRNRRSPDYPKSTHQTRSISRSRSPDYSRYDNQTSYRRNHRSPENSRFRTSPNPRVHVDPNRKVNYGERNKQYLDRDRGGYRNGNGDGPESESDEELKGLSYEEYRRLKRQKIRKMLRNCIWNVTPSPPRGDNEFDEDEPEEVVEEKDELDLKAKGGGSSESDSESESGSDDSVSDSDDSRSRRRRKKKSSRSRRRRKRSVSVSDSESDDSEEEDRRKKKNSRSRARRKKSVSVSESESDYSTDDSEEERRKKKKSKRSTKRKSSSRKTSKRKRRSSSRKGTDSDSEESSESDRSKSKRSHRSSSKSSKKRSEKGSESSASDDNSDSANENKSKPKADDLEKTENDSEMLMFKEMMESKKKLALDDEPEVGPMPLPRAEGHISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSADEISKFEDLGYVMSGSRHQRMNAIRIRKENQVYSAEDKRALAMFNYEEKAKREQKVMADLQRLVQRHIGEETGPSHDPFGGKATEDPDA 555
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00285 555 MobiDBLite consensus disorder prediction 111 154 - -
Hean1g00285 555 MobiDBLite consensus disorder prediction 234 249 - -
Hean1g00285 555 MobiDBLite consensus disorder prediction 1 154 - -
Hean1g00285 555 MobiDBLite consensus disorder prediction 304 327 - -
Hean1g00285 555 PANTHER NF-KAPPA B ACTIVATING PROTEIN 7 280 IPR040466 GO:0005634(PANTHER)|GO:0010468(PANTHER)
Hean1g00285 555 MobiDBLite consensus disorder prediction 250 270 - -
Hean1g00285 555 Coils Coil 509 529 - -
Hean1g00285 555 MobiDBLite consensus disorder prediction 9 61 - -
Hean1g00285 555 MobiDBLite consensus disorder prediction 169 439 - -
Hean1g00285 555 Pfam NF-kappa-B-activating protein C-terminal domain 433 531 IPR009269 GO:0003682(InterPro)
Hean1g00285 555 MobiDBLite consensus disorder prediction 328 348 - -
Hean1g00285 555 MobiDBLite consensus disorder prediction 377 417 - -
Hean1g00285 555 MobiDBLite consensus disorder prediction 62 82 - -
Hean1g00285 555 MobiDBLite consensus disorder prediction 532 555 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00285 K25931 NF-kappa-B-activating protein