Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean1g00287 | ATGATTGACAAAACAGACTCAAAAGGAAAGATATTGCCTGAGATGATTTTAATCTGCCAAAATCTAGTAAACAATCTCCAACATCCAAATGAGTACATTCGTGGTGTTACTATAAGGTTTCTTTGTCGTCTCAACGAGACAGAGATTATTGTGCCCTTAATCCCATCTATACTGGCTAATCTTGAACACCGCCATCCGTACATAAGAAGGAATGCAATCCTTGCTGTAATGGCAATCTACAAGCTTCCACAGGGTGAACAGCTTCTAGTTGATGCTCCAGAGATGATTGAGAAAGTTCTCTCAACAGAAGCAGATCAATCAGCCAAAAGAAATGCTTTTCTCATGCTTTTCACATGTGCACAGGATCGTGCTGTTAATTACCTTTTGACCCATGTTGACCGAGTGTCTGAATGGGGAGAATTGCTTCAAATGGTTGTGTTGGAGTTGATTCGTAAAGTGTGTAGAGCAAACAAAGGAGAAAAAGGCAAGTATATCAAGATTATCATATCTCTATTAAGCGTTCCTTCTGCTGCTGTTATTTATGAATGTGCTGGCACACTCGTGTCTTTATCATTTGCTCCTACTGCAATTAAGGCTGCAGCCAATACCTACTGCCAGCTACTACTCTCTCAAAGTGACAACAATGTCAAACTTATTGGGGAAGAATTATGGGTTTGGGACTATTTAATTTGA | 693 | 39.68 | MIDKTDSKGKILPEMILICQNLVNNLQHPNEYIRGVTIRFLCRLNETEIIVPLIPSILANLEHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEADQSAKRNAFLMLFTCAQDRAVNYLLTHVDRVSEWGELLQMVVLELIRKVCRANKGEKGKYIKIIISLLSVPSAAVIYECAGTLVSLSFAPTAIKAAANTYCQLLLSQSDNNVKLIGEELWVWDYLI | 230 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean1g00287 | 230 | Gene3D | - | 5 | 221 | IPR011989 | - | |
| Hean1g00287 | 230 | PANTHER | COATOMER SUBUNIT BETA | 1 | 219 | IPR016460 | GO:0005737(InterPro)|GO:0006886(InterPro)|GO:0006888(PANTHER)|GO:0006891(PANTHER)|GO:0030126(PANTHER) | |
| Hean1g00287 | 230 | Pfam | Adaptin N terminal region | 14 | 219 | IPR002553 | GO:0006886(InterPro)|GO:0016192(InterPro)|GO:0030117(InterPro) | |
| Hean1g00287 | 230 | SUPERFAMILY | ARM repeat | 14 | 218 | IPR016024 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean1g00287 | K17301 | coatomer subunit beta |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr1:7340799 | Hean4g00002 | Hean-Chr4:228372 | dispersed | |
| Hean | Hean-Chr1:7340799 | Hean14g02301 | Hean-Chr14:124513018 | transposed |