AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean1g00328 | ATGGGGACTGAAAATCCTAACCGTCCAAATTTTCATCAAGGGCCTACTGCTACACCTTTTGCAGCTCCTCAAACCAACATGCCCTTTCCTTCATCTCGTCCCATGGTTGGATCACAGCCCTCTGCTATCAGGCCAAATACATCTCCATTTTCTACTCCTGGGCCCACGGCTGGAGCTGGGACTCCTGGTTTTAGGCCCATGCAACCAGGTAGGCCCGCTCCTTCATATGGCCCGCCAACTACTGGACCACCCCAGCGTTTCCCAGCTTCACAGTTTCCATCATCTCAACCACCCGTTTCACAAACGTCAAATGTGGGCCAGCCCATTATGCCTCCACCAACGAGACCACCACCTCCGGGCCATGTTCCATCTGTACCGATGGGATCTCCACCCCAAAGCTTGTATAGTGTTTCTTCCGGTAATAACCCTCCATATTCTGTTTCCGGACCAAACATCCAGCCACCGCCATCTTCAACCAGACCGTCTTATCCTGGCTATCCGGGTATACAGGGTATACAGAGTAGCACAGTAAGTCCACCGCCACCACCGCCAGTTTATCAACAAGGAGGTTATGGCCCACCTCAGCCCGCCATACCTGCTCCCTTTTCTTCTCATCAAGGTGGTTATGGACAAGTTCCCGTTCCGCCAGTTGCATCGTCAACAGGAATGTATGCAGGTGGGTCCGCACCGCCTACAGGAGTTATGTCGGGTTTGGTAGAAGATTTTAGCTCACTTTCTCTCGGATCTGCTCCTGGGTCGTTTGATGGGGGGGTTGATGCTAAAGCGTTGCCAAGACCACTGGATGGTGATGTTGAACCAACGTCTTTTGCTGGGATGTATCCCATGAATTGTGATTCTAGATATCTAAGACTTACGACTAGTGCTATACCGAATTCACAGTCTTTGGTTTCGAGGTGGCAGTTGCCTCTTGGAGCAGTTGTTTGTCCACTGGCAGAACCTCCTGAGGGGGAGGAAGTGCCAGTAGTTAACTTTGCCACAATGGGTATCGTTCGTTGTAGAAGATGTCGTACGTATGTGAATCCGTATGTGACTTTTACTGATGGTGGGAGAAAGTGGAGGTGCAATATATGTGCTTTACTTAATGATGTGCAAAATGATTATTTCGCTCATTTGGATGCCACTGGAAAAAGAGTTGATCTTGATCAACACCCTGAGCTTACAAAGGGATCTGTGGAATTTGTTGCTCCAGCTGAGTATATGGTTCGGCCTCCAATGCCACCATTATACTTTTTTATGATTGACGTGTCAATATCTGCAGTTAAAAGTGGTATGCTTGAGGTGATGGCACAAACCATTAAATCTTGTTTGGATAAATTGCCGGGCAGCCCAAGAACACAAATTGGGTTCATAACTTTTGACAGCACAATTCACTTTTACAATATGAAGTCAACTTTGACACAGCCTCAAATGATGGTCGTATCAGATTTGGAAGATATTTTTGTTCCATTGCCAGATGATCTTCTTGTCAACCTGTCAGAATCCAGACCTGTGGTGGAGGCTTTTCTGGATAGCTTGCCTTCTATGTTTCAGGACAATGTTAATGTGGAATCTGCTTTTGGGCCCGCCCTCAAAGCCGCTTATATGGTTATGAGTCAACTTGGAGGGAAATTGTTAATTTTCCAGAGCACGCTTCCCTCACTTGGTGTTGGTCGTTTGAAGTTGCGTGGAGACGATCTTCGTGTTTATGGAACAGATAAAGAGCATACCTTACGAATACCAGAAGACCCGTTTTATAAACAGATGGCTGCTGATTTCACAAAATACCAAGTTGCAGTGAATGTATATGCGTTTAGTGACAAGTATACTGATATAGCCTCATTAGGCACTTTAGCAAAATACACTGGCGGCCAGGTATATTATTATCCAAGCTTTCATTCCGCAATTCACAGAGACAAGTTGAGACATGAGTTGTCTAGAGATCTCACTAGAGAAACTGCATGGGAAGCTGTAATGCGCATCCGATGTGGGAAAGGAGTGCGTTTCACCTCGTATCATGGGAATTTTATGCTAAGATCAACGGATCTAATAGCACTTCCCGCAGTTGATTGTGATAAAGCTTATGCAATGCAGTTTGCTCTTGAAGAGACATTGCTTACAACGCAGATTGTGTACTTCCAAGTGGCGTTACTATACACTGCATCTTGCGGTGAAAGGCGTATTAGAGTACACACCGCTGCAGCATCGGTGGTTGCAGATTTAGGAGAGATGTACCGCCAGGCAGATACTGGTGCTGTTGTTTCTTTGCTTAGTCGGTTAGCAATCGAGAAATCATTATCATATAAACTGGAAGATGCTCGTAATGCTGTTCAACAAAAAATAGTGAAAGCCCTGAAAGAATATCGAAAACTATATTCAGTGCAGCATCGTGTAGGAAGCAGGATGATCTACCCAGAATCACTCAAATATTTGCCCTTATATGGATTATCACTATGTAAATCAACAGCACTTCGTGGTGGTTATGCTGATGCTCAGCTTGATGAACGTTGTGCAGCAGGCTTCACCATGATGGCTTTACCTGTTAAAAAAATGTTAAAGCTCTTATATCCTAGCTTATTAAGAGTAGACGAGTATCTTGTCAAGGCGCCTGCTGTGGATGATGAATTTGACAGAGTTTGTAAAAGGCTGCCACTTGTTGCTGAGAGCTTAGATTCTAGAGGAATTTATATATTTGATGACGGCTTTCGTTTTGTTGTGTGGTTTGGCCGCATGCTTTCACCCGATTTAGCCAGGAATCTAGTTGAGGAAGATCCAGCTACAGATTTCTCAAGGGTTTGTCTGACTGAACGTAACAATGAAATGTCAAGAAAGCTGATGCGGATACTAAAGAAACTTAGAGAGGCTGATAAATCATATTATCAGTTGTGTCATCTCGTGAGACAAGGCGAACAACCCCGTGAAGGTTTCTTTCTACTCTTGAATTTAGTTGAGGACCAGGTTGGTGGTATGAGCGGTTATGCTGATTGGATGCTTCAGATACATCGACAAGTACAACAATAA | 3018 | 44.8 | MGTENPNRPNFHQGPTATPFAAPQTNMPFPSSRPMVGSQPSAIRPNTSPFSTPGPTAGAGTPGFRPMQPGRPAPSYGPPTTGPPQRFPASQFPSSQPPVSQTSNVGQPIMPPPTRPPPPGHVPSVPMGSPPQSLYSVSSGNNPPYSVSGPNIQPPPSSTRPSYPGYPGIQGIQSSTVSPPPPPPVYQQGGYGPPQPAIPAPFSSHQGGYGQVPVPPVASSTGMYAGGSAPPTGVMSGLVEDFSSLSLGSAPGSFDGGVDAKALPRPLDGDVEPTSFAGMYPMNCDSRYLRLTTSAIPNSQSLVSRWQLPLGAVVCPLAEPPEGEEVPVVNFATMGIVRCRRCRTYVNPYVTFTDGGRKWRCNICALLNDVQNDYFAHLDATGKRVDLDQHPELTKGSVEFVAPAEYMVRPPMPPLYFFMIDVSISAVKSGMLEVMAQTIKSCLDKLPGSPRTQIGFITFDSTIHFYNMKSTLTQPQMMVVSDLEDIFVPLPDDLLVNLSESRPVVEAFLDSLPSMFQDNVNVESAFGPALKAAYMVMSQLGGKLLIFQSTLPSLGVGRLKLRGDDLRVYGTDKEHTLRIPEDPFYKQMAADFTKYQVAVNVYAFSDKYTDIASLGTLAKYTGGQVYYYPSFHSAIHRDKLRHELSRDLTRETAWEAVMRIRCGKGVRFTSYHGNFMLRSTDLIALPAVDCDKAYAMQFALEETLLTTQIVYFQVALLYTASCGERRIRVHTAAASVVADLGEMYRQADTGAVVSLLSRLAIEKSLSYKLEDARNAVQQKIVKALKEYRKLYSVQHRVGSRMIYPESLKYLPLYGLSLCKSTALRGGYADAQLDERCAAGFTMMALPVKKMLKLLYPSLLRVDEYLVKAPAVDDEFDRVCKRLPLVAESLDSRGIYIFDDGFRFVVWFGRMLSPDLARNLVEEDPATDFSRVCLTERNNEMSRKLMRILKKLREADKSYYQLCHLVRQGEQPREGFFLLLNLVEDQVGGMSGYADWMLQIHRQVQQ | 1005 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean1g00328 | 1005 | Gene3D | - | 283 | 395 | - | - | |
| Hean1g00328 | 1005 | MobiDBLite | consensus disorder prediction | 87 | 108 | - | - | |
| Hean1g00328 | 1005 | SUPERFAMILY | C-terminal, gelsolin-like domain of Sec23-24 | 871 | 1005 | IPR036180 | - | |
| Hean1g00328 | 1005 | SUPERFAMILY | Helical domain of Sec23-24 | 748 | 855 | IPR036175 | GO:0006886(InterPro)|GO:0006888(InterPro)|GO:0030127(InterPro) | |
| Hean1g00328 | 1005 | MobiDBLite | consensus disorder prediction | 67 | 86 | - | - | |
| Hean1g00328 | 1005 | MobiDBLite | consensus disorder prediction | 1 | 201 | - | - | |
| Hean1g00328 | 1005 | SUPERFAMILY | beta-sandwich domain of Sec23-24 | 169 | 746 | - | - | |
| Hean1g00328 | 1005 | Pfam | Sec23-Sec24 zinc finger | 336 | 374 | IPR006895 | GO:0006886(InterPro)|GO:0006888(InterPro)|GO:0008270(InterPro)|GO:0030127(InterPro) | |
| Hean1g00328 | 1005 | Gene3D | von Willebrand factor, type A domain | 413 | 650 | IPR036465 | - | |
| Hean1g00328 | 1005 | Gene3D | Sec23-Sec24 helical domain | 737 | 1003 | - | - | |
| Hean1g00328 | 1005 | SUPERFAMILY | Zn-finger domain of Sec23-24 | 325 | 410 | IPR036174 | GO:0006886(InterPro)|GO:0006888(InterPro)|GO:0008270(InterPro)|GO:0030127(InterPro) | |
| Hean1g00328 | 1005 | MobiDBLite | consensus disorder prediction | 1 | 55 | - | - | |
| Hean1g00328 | 1005 | Pfam | Sec23-Sec24 beta-sandwich domain | 653 | 736 | IPR012990 | - | |
| Hean1g00328 | 1005 | SUPERFAMILY | vWA-like | 411 | 650 | IPR036465 | - | |
| Hean1g00328 | 1005 | MobiDBLite | consensus disorder prediction | 109 | 126 | - | - | |
| Hean1g00328 | 1005 | MobiDBLite | consensus disorder prediction | 148 | 162 | - | - | |
| Hean1g00328 | 1005 | Gene3D | Severin | 856 | 984 | IPR029006 | - | |
| Hean1g00328 | 1005 | CDD | Sec24-like | 411 | 652 | IPR041742 | GO:0006886(InterPro)|GO:0006888(InterPro)|GO:0030127(InterPro) | |
| Hean1g00328 | 1005 | FunFam | protein transport protein Sec24D isoform X1 | 413 | 650 | - | - | |
| Hean1g00328 | 1005 | Pfam | Sec23-Sec24 helical domain | 748 | 851 | IPR006900 | GO:0006886(InterPro)|GO:0006888(InterPro)|GO:0030127(InterPro) | |
| Hean1g00328 | 1005 | MobiDBLite | consensus disorder prediction | 129 | 147 | - | - | |
| Hean1g00328 | 1005 | PANTHER | SEC24-RELATED PROTEIN | 4 | 1005 | IPR050550 | GO:0000149(PANTHER)|GO:0008270(PANTHER)|GO:0030127(PANTHER)|GO:0070971(PANTHER)|GO:0090110(PANTHER) | |
| Hean1g00328 | 1005 | Pfam | Sec23-Sec24 trunk domain | 411 | 647 | IPR006896 | GO:0006886(InterPro)|GO:0006888(InterPro)|GO:0030127(InterPro) | |
| Hean1g00328 | 1005 | MobiDBLite | consensus disorder prediction | 176 | 200 | - | - | |
| Hean1g00328 | 1005 | Gene3D | - | 284 | 736 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean1g00328 | K14007 | protein transport protein SEC24 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr1:8827031 | Hean6g00001 | Hean-Chr6:68278 | dispersed | |
| Hean | Hean-Chr1:8827031 | Hean6g01954 | Hean-Chr6:52145663 | transposed |