AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00348 ATGATGACCGGGTTGATCCAAGACCAAAATCTCGAAAAACAGATCGAGAAACAGATCGGATGCATGTCCGGTTTCCTTCATATCTTCGATCGCCAACAGATTTTAACCGGAAAGCGTATTTACTCCACTAAACGCCTCCCTTCTTCCACTGGGGCAGATGCATCACCGGAGTCAGTTAAGTCAGTTAAATCGGTTAAGTTTGTTCACTCGAATGCGATTCGAGAAACCGAGAAGCCGGTGGTGAAAGCAGAGCCGGATGTTACAGTACCGGAAAGTCCAGACCGGTTCCAGCGGTCTCCGGCGGCGAATTCAAATGTTTTTCCGGCGACAACGCCGCCGAGATCGCCACTACCGCTTCCGATATTTGAGATGAAAGAGGGATCCATGAAGAATTCATGGAAGTTCTGCAAGGAGATGCCGAGGTTATCACTTGACAGCAGAGCAACGGTTGATTCGAAAGGGAGTCTTTGTGCGAAAGAGATCCAGCGAACAAATGACGAAAGCTACGACAAGCAACGACGGTCGCCGAGTGTGATTGCGCGACTTATGGGACTAGACCAGCTGCCTTCGTCGTCTTCGGATTCGGTTTCTAGTCCGGAAACGGTTAAGAAACCGGAGCTCCGAAGATCGGCGTCTGAATCTAGGGTTTCGAGAGATTTATTTCACTCGAGATTCATAGAGTGCAACAATAGTCAGGTTAAACAACAACTAAATCAATCAGATGAAACAAATCTGAATAGTATTATTCGAGAAAGTGCGATTACCGCTAACACGAATGGTAATGGTAATGGTAATATTAACAGAAATGTTCAGAGTGGCAGAGTAATGGAGTCGATGAAATATTCGAGAAATCAGAAGAATGAAGCTCCTAAAGCGTCTCAATGGCGGTCGCCTCAACAGAGAAGAAGCTTCTTTGACACAGCAGATGTGTTTCCGGAGCCGAAACAGACTAATGTGCCGGTGTATGTCGATTCGGAGAAGAGTTTGAAACTGAGAGGTATCGATGAGCAGGCGAAAGATCTAGAGACGCTCAAGCATATCCTAGAAGCGTTGCAATTCAAAGGTCTGTTACATTGTAACAGACCTTTAACCAGAGACAGCCAGCGGAACTTCGTGTATGATCCGAGTTTCCTTTCAGACGAGGTAAACACGGGCCACATGAAGCCGTGGCGGTCACCTGGTCCGAATCGAAGATATTCAAGCGAGATCTCACCGTCCGCCAGTCCAAGAAAGGATCGTGGAGTAGTCGATAGAAGCGGTAGGAGTCCGGTGCGAGCTAGAAACTCTCCTAACTCGAAAAGCGGAAACACAATCGTGAAGCGAAAACTGTTAACCATCGAAACCGAAAGGCGCATACACGAATCGTCTGATTCGCGAAGAAATTCGCCGATTAACTCCCCTAAACTTACTCCTAAAAGAAGCGGAAACCGATCCGATCATTATTCGGTCACTAATCACTCTCCGAGAAGCAACAGATCGACCGAAACGGTTTACTCGAAGCATAAGGTTGTTAGAAACCTTCTTATCGAAGATGAATCATCATCATTTTCTGAAAGTTCTGGTAGCACAACTTCTCAGTCTGATCTAGAGAGATCAAAACTGGAAGAAAACAGAGAAGGAAAAAGTTTGTTAGCAAGATGTGACAAACTCCTACACAGCATAGCTGAAATGAACAGCATTACCGAGTCACACACCAGTTTCAACTCAGTCATACCGAGTCCAGTCTCCGTTCTCGACTCAGCGTTTGACAAAGATGAGTCATCATCTCCTTCACCTGTCATGAAACGCAGCATTGATTTCAAAGATCTGACCGTTGATCTGGAAGAGGATATTTGGCGCTCGGTTATTTCACCGGCAAGTTCAACGAAAGACGACGAGTTCCTGTTCATCGCCGACGACTCGGACTTCACATACATCTCGGAAATACTCCGAGCATTGAAATATGTCTCAGACGACTCAAGCGTGTTCTACTTCCTTGAAAAGCAACAAAAGGCTCGAAACTCATTGGAAAACGATACGACAAGATGTTCAAAGCTTAGGCGGAAGCTCGTGTTTGACGCGGTCAATGAAATCATCGACAGAAACAGAGAGCTTCCGCCGTGGAAGTTAACGGAGTCAAACGACTCCGTTAACCAGATCTGTTTGGAGTTTCAGAAGATTCGCGAACCCGAAACGGCTGAAAATTTGTTAGATCTCATTTGTACTTTGCTGAAAAAAGACCTTGCCGGAAACAATGTGTGGAGTGATCAGCCCGTCGAGGTTTCGGAGGCCGTACTGTACATCGAACGGCTGATATTCAAGGATCTGGTGAGTGAAACAATCCGAGATCTCGCTGAATTTGCCGGGAAAACATCTATGGTGTTCGCGCCACGAAGGAAATTAGTTTTTTAA 2391 46.05 MMTGLIQDQNLEKQIEKQIGCMSGFLHIFDRQQILTGKRIYSTKRLPSSTGADASPESVKSVKSVKFVHSNAIRETEKPVVKAEPDVTVPESPDRFQRSPAANSNVFPATTPPRSPLPLPIFEMKEGSMKNSWKFCKEMPRLSLDSRATVDSKGSLCAKEIQRTNDESYDKQRRSPSVIARLMGLDQLPSSSSDSVSSPETVKKPELRRSASESRVSRDLFHSRFIECNNSQVKQQLNQSDETNLNSIIRESAITANTNGNGNGNINRNVQSGRVMESMKYSRNQKNEAPKASQWRSPQQRRSFFDTADVFPEPKQTNVPVYVDSEKSLKLRGIDEQAKDLETLKHILEALQFKGLLHCNRPLTRDSQRNFVYDPSFLSDEVNTGHMKPWRSPGPNRRYSSEISPSASPRKDRGVVDRSGRSPVRARNSPNSKSGNTIVKRKLLTIETERRIHESSDSRRNSPINSPKLTPKRSGNRSDHYSVTNHSPRSNRSTETVYSKHKVVRNLLIEDESSSFSESSGSTTSQSDLERSKLEENREGKSLLARCDKLLHSIAEMNSITESHTSFNSVIPSPVSVLDSAFDKDESSSPSPVMKRSIDFKDLTVDLEEDIWRSVISPASSTKDDEFLFIADDSDFTYISEILRALKYVSDDSSVFYFLEKQQKARNSLENDTTRCSKLRRKLVFDAVNEIIDRNRELPPWKLTESNDSVNQICLEFQKIREPETAENLLDLICTLLKKDLAGNNVWSDQPVEVSEAVLYIERLIFKDLVSETIRDLAEFAGKTSMVFAPRRKLVF 796
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00348 796 Pfam DUF761-associated sequence motif 168 193 IPR032795 -
Hean1g00348 796 PANTHER LONGIFOLIA PROTEIN 2 784 IPR033334 GO:0051513(InterPro)
Hean1g00348 796 MobiDBLite consensus disorder prediction 443 458 - -
Hean1g00348 796 Pfam Domain of unknown function (DUF4378) 635 772 IPR025486 -
Hean1g00348 796 MobiDBLite consensus disorder prediction 459 494 - -
Hean1g00348 796 MobiDBLite consensus disorder prediction 186 215 - -
Hean1g00348 796 MobiDBLite consensus disorder prediction 201 215 - -
Hean1g00348 796 MobiDBLite consensus disorder prediction 186 200 - -
Hean1g00348 796 MobiDBLite consensus disorder prediction 84 112 - -
Hean1g00348 796 MobiDBLite consensus disorder prediction 512 538 - -
Hean1g00348 796 MobiDBLite consensus disorder prediction 424 441 - -
Hean1g00348 796 MobiDBLite consensus disorder prediction 512 528 - -
Hean1g00348 796 MobiDBLite consensus disorder prediction 279 300 - -
Hean1g00348 796 MobiDBLite consensus disorder prediction 382 499 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00348 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
100637 Hean10g00435 Hean1g00348
402258 Hean11g02478 Hean1g00348
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr10:14424360 Hean1g00348 Hean-Chr1:9875783 dispersed
Hean Hean-Chr15:6177659 Hean1g00348 Hean-Chr1:9875783 dispersed
Hean Hean-Chr1:9875783 Hean7g02558 Hean-Chr7:136885597 dispersed
Hean Hean-Chr1:9875783 Hean11g02478 Hean-Chr11:108120468 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hean17g01632 . 1 925 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 28.586 9.50e-73 254.0
Hean16g03533 ACH 8 703 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 26.05 3.37e-42 161.0
Hean16g04636 . 1 775 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 39.064 2.07e-165 496.0
Hean15g00377 ACH,WGDA 307 540 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 37.5 1.99e-39 150.0
Hean15g00526 ACH,WGDA 1 922 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 39.641 3.94e-165 500.0
Hean15g00752 . 643 824 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 41.799 2.54e-38 152.0
Hean15g00958 WGDA 1 282 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 46.181 5.14e-54 197.0
Hean15g01139 ACH 203 902 TRM (TON1 Recruiting Motif) Superfamily AT3G02170 29.552 1.03e-56 206.0
Hean15g03186 ACH 32 245 TRM (TON1 Recruiting Motif) Superfamily AT5G51850 37.931 3.41e-27 113.0
Hean15g03514 WGDA 719 927 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 40.094 1.81e-31 120.0
Hean15g03516 ACH,WGDA 1 927 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 27.329 2.53e-54 201.0
Hean14g02855 . 11 903 TRM (TON1 Recruiting Motif) Superfamily AT3G02170 29.268 2.37e-68 242.0
Hean14g03256 WGDA 61 921 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 29.825 4.82e-69 244.0
Hean14g03782 ACH 625 919 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 34.615 6.95e-23 101.0
Hean14g04255 ACH 25 650 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 32.679 2.14e-65 227.0
Hean13g00956 WGDA 497 703 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 30.332 1.24e-18 87.8
Hean13g01177 WGDA 325 826 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 26.449 2.05e-34 139.0
Hean13g04117 . 597 730 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 44.444 4.34e-16 71.2
Hean13g04602 ACH 1 792 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 28.302 9.88e-65 229.0
Hean12g00165 WGDA 1 196 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 39.806 3.99e-28 118.0
Hean12g02591 WGDA 1 282 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 39.731 2.25e-42 163.0
Hean11g02478 ACH,WGDA 287 540 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 42.756 2.49e-53 191.0
Hean11g04238 WGDA 3 513 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 34.387 5.12e-56 192.0
Hean10g00290 ACH,WGDA 1 923 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 41.517 0.0 558.0
Hean10g00435 ACH,WGDA 314 540 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 40.4 6.14e-37 144.0
Hean10g03917 WGDA 1 259 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 35.252 2.10e-25 109.0
Hean9g01146 . 4 811 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 32.398 1.30e-98 322.0
Hean9g03310 ACH,WGDA 1 902 TRM (TON1 Recruiting Motif) Superfamily AT3G02170 28.967 4.48e-64 229.0
Hean8g01275 ACH 204 462 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 30.502 2.07e-26 110.0
Hean8g03394 WGDA 1 1023 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 36.372 5.14e-130 413.0
Hean8g03639 WGDA 665 824 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 43.478 3.55e-32 129.0
Hean7g00247 . 9 425 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 26.124 3.46e-27 111.0
Hean7g02068 WGDA 731 919 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 30.0 2.90e-13 65.5
Hean7g02069 WGDA 64 398 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 29.06 8.03e-16 78.6
Hean7g02558 ACH 555 913 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 36.269 8.94e-43 166.0
Hean6g00179 . 10 44 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 60.0 6.33e-07 48.1
Hean6g00615 . 73 414 TRM (TON1 Recruiting Motif) Superfamily AT4G00770 28.652 2.67e-15 75.5
Hean6g00721 ACH,WGDA 191 722 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 30.961 2.83e-43 165.0
Hean6g00722 . 1 60 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 40.0 1.07e-09 50.1
Hean6g01033 ACH,WGDA 1 922 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 40.36 5.44e-177 533.0
Hean5g00582 . 23 367 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 25.691 2.98e-12 64.7
Hean5g02692 . 599 807 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 37.559 4.38e-40 157.0
Hean5g03245 ACH,WGDA 1 1023 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 42.5 0.0 589.0
Hean4g01508 ACH,WGDA 599 1004 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 41.627 3.77e-68 240.0
Hean4g01972 WGDA 434 824 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 32.5 1.74e-37 146.0
Hean4g02630 ACH,WGDA 1 921 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 43.625 0.0 585.0
Hean4g03782 ACH,WGDA 1 785 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 29.312 3.90e-66 233.0
Hean2g01334 WGDA 718 1010 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 44.444 9.16e-58 210.0
Hean2g02146 WGDA 497 701 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 33.816 1.79e-22 100.0
Hean2g02352 ACH,WGDA 11 810 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 30.562 3.40e-73 253.0
Hean1g00348 ACH,WGDA 287 540 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 41.98 4.51e-52 188.0
Hean1g00848 . 23 121 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 39.423 3.38e-14 70.5
Hean1g03503 WGDA 3 510 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 37.153 2.00e-68 225.0
Hean1g03765 ACH 12 514 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 28.053 4.88e-26 111.0
Hean1g03818 . 12 527 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 27.977 2.07e-27 116.0