Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean1g00354 | ATGTCGAAGAATTTACGGTGGATCGGTTTTGTTTTTGTTATCTTATACTTCTTATCATCCCCTTGTGGGGTGTTTGCTATTGATGATTTCAGACAAGCATTTCCAATCGTAGAACCGGATCCTGGTCATACAAAACTTCGTCTTTCTAGTGAAGGACTGGAGGCTATTAGGAGAATAACCAATCCTATTGCAGCCGTTGCCGTGATTGGTCCATATCGATCTGGAAAGTCCTTTACGCTTAACCAACTTCTCTCACTTTCTTGTTATGAAGGTTTTGGTGTTGGCCACATGCGTGACACAAAAACGAAAGGAATATGGGTATGGGGAACTCCAGTTGAAATGGATATTAATGGGGTGAAAACGTCTGTATTTTATCTCGATACCGAGGGATTTGAAAGCGTAGGGAAATCAAACGTCTACGATGACAGAATATTTGCTCTTGCGACAGTTTTGAGCTCGGTCCTTATCTACAACTTGCCTGAGACGATACGCGAAGCTGATATATCGCGATTGTCATTTGCCGTTGAGCTTGCCGAAGAGTTTTACGGAAGAGTCGAGGGGCAAGATGTGGCGTTTGAACCGGCAAAACTACTGTGGCTTATACAACGTGACTTTTTACAGGGGAAGTCGGTAAAAGAAATGGTGGATGAAGCTCTACGACATGTTCCTAACGCTAATGGTGACAAAAATATTGATCAGGTTAACCAGATTCGAGACTCACTAGCTATTATGGGTGACAATAGCACAGCATTCAGCTTACCACAACCACATCTCCAAAGGACAAAGCTTTGCGACTTGAAAGACGAGGAGCTCGATCAGAGTTACGTTAGAAAGCGAGAACAGTTGAAAGAAGTTGTTAAATCTGTTATTCGTCCAAAGATTGTACAGGGCAAATCACTTAACGGGAAGGAGTTTGTAGCTTTTCTTGAAAAGATTTTGGAAGCTTTAAACAAGGGTGAGATTCCATCGACAGGGTCTCTTGTTGAGATATTTAACAAAAAAATATTGGAGAAATGTTTGAAGATATACGAGGATAGTATGACAAAAGTGACTTTACCGATTTCCGAAGAATCATTACAATCCATCCACGAAGCTTCTAGAACCGAATCTTTGAAATCTTTCGATGAACAACATTTCGGTCGTCACCATGCCAAAAAATCGGTTGAAGCACTTGATGAAGATATTGCAAAGATGTTTAAGAATTTTGTTATGGCAAACCAATATCAGTCGTCGAAATTGTGTGAGGAACTTTATACATTGTGTGAGGACAAAATGGACCAGCTTCAAGTACTCCGACTACCGTCAATGGCTAAGTTCAATGCCGGTTTTCTTCAATGCAACCAAAGTTTTGAAAAAGTGTGCGTCGGGCCTTCTAAAACCACATATGAGCAACGAATGGTGAAGATGATGGAAAAGTCAAAGTCTTTGTTTATAAAGGAATATAATCACAAATTATTTAACTGGTTGGTGGCCTTTTCGCTTGTCATGGTGATTGTGGGCCGTTTTGTCATAAAGTTCATTTTGCTTGAAATCGGAGCTTGGATACTTTTTATATTTTTGGAGACGTACACGCGGATGTTTTGGTCACCTGAGTCTCTTTATTACAACCCCGTTTGGCATGGCATTGTAGCAACATGGGAAACACTTGTTTACAGCCCGATTCTTGATTTAGACAGATGGGCGATACAAATCGGATTCATGGCATCAATATTGTTAATTTACTGGCGGTGTTTCAGAAGAAGGAAACACGGGTCCCACTCTTTGTTACCGTTGTACGCAAACAATTCAAAAGTTCGGGATAGATCAGAATAG | 1812 | 40.67 | MSKNLRWIGFVFVILYFLSSPCGVFAIDDFRQAFPIVEPDPGHTKLRLSSEGLEAIRRITNPIAAVAVIGPYRSGKSFTLNQLLSLSCYEGFGVGHMRDTKTKGIWVWGTPVEMDINGVKTSVFYLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPETIREADISRLSFAVELAEEFYGRVEGQDVAFEPAKLLWLIQRDFLQGKSVKEMVDEALRHVPNANGDKNIDQVNQIRDSLAIMGDNSTAFSLPQPHLQRTKLCDLKDEELDQSYVRKREQLKEVVKSVIRPKIVQGKSLNGKEFVAFLEKILEALNKGEIPSTGSLVEIFNKKILEKCLKIYEDSMTKVTLPISEESLQSIHEASRTESLKSFDEQHFGRHHAKKSVEALDEDIAKMFKNFVMANQYQSSKLCEELYTLCEDKMDQLQVLRLPSMAKFNAGFLQCNQSFEKVCVGPSKTTYEQRMVKMMEKSKSLFIKEYNHKLFNWLVAFSLVMVIVGRFVIKFILLEIGAWILFIFLETYTRMFWSPESLYYNPVWHGIVATWETLVYSPILDLDRWAIQIGFMASILLIYWRCFRRRKHGSHSLLPLYANNSKVRDRSE | 603 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean1g00354 | 603 | FunFam | Guanylate-binding family protein | 297 | 429 | - | - | |
| Hean1g00354 | 603 | Pfam | Guanylate-binding protein, N-terminal domain | 45 | 283 | IPR015894 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Hean1g00354 | 603 | PANTHER | GUANYLATE BINDING PROTEIN | 33 | 554 | - | GO:0003924(PANTHER)|GO:0005525(PANTHER) | |
| Hean1g00354 | 603 | Pfam | Guanylate-binding protein, C-terminal domain | 297 | 418 | IPR003191 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Hean1g00354 | 603 | CDD | GBP | 57 | 286 | - | - | |
| Hean1g00354 | 603 | FunFam | Guanylate-binding family protein | 28 | 296 | - | - | |
| Hean1g00354 | 603 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 32 | 293 | IPR027417 | - | |
| Hean1g00354 | 603 | Gene3D | - | 297 | 430 | - | - | |
| Hean1g00354 | 603 | Gene3D | - | 29 | 296 | IPR027417 | - | |
| Hean1g00354 | 603 | ProSiteProfiles | GB1-RHD3-type guanine nucleotide-binding (G) domain profile. | 60 | 180 | IPR030386 | GO:0005525(InterPro) | |
| Hean1g00354 | 603 | SUPERFAMILY | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 296 | 517 | IPR036543 | GO:0003924(InterPro)|GO:0005525(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean1g00354 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 402257 | Hean11g02472 | Hean1g00354 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr1:10014192 | Hean4g00085 | Hean-Chr4:1882537 | dispersed | |
| Hean | Hean-Chr2:84447705 | Hean1g00354 | Hean-Chr1:10014192 | transposed | |
| Hean | Hean-Chr1:10014192 | Hean11g02472 | Hean-Chr11:107899327 | wgd |