Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean1g00357 | ATGGCGATAATGCACCAAATTTCTCTCACAAACAACCTTCAATTCCTCCCCAGTAAACCCATACTAATCAAACCCACACCTCCAAAAAACCCCATCTTCACATTTCCCACATCACTAAATAAAAAACTGAACAGCAGATTATTATCAGTCAGTGCTAACGGCAGTAACCGCGTTACGACGTCGTTTGATTACAACAACAACAACAATGAGCAGTATGAGTATGAACAAGGTTTGAATGGAAGGGGGGGTCAACAACAACAACAACAGTACCCTAGACCGGAGGAGATAGAGTGGAAAAAGGAGTTGTGTAATTGGGTTCAGTTGATTGGAACCGTTGGTACTCCGGTTGAGTTTAAGCAGCTTGGGTCTGGTAAGGTGCTTGCGTGGTGCCGGCTTGCTGTTAAGAAATCGGCTACTGATACTACTTGGATCAATTTGACCTTTTGGGATGAGGTGGCACACATCGCTTCTCAGCATGTGGAAAAAGGACAGCAAATATATGTAACAGGTCGTCTTGTTTCCGATACAGTCGATAGTGATGACGGGAAGCAACAAACATATTATAAGGTAGTCGTTCAACAGCTAAAATTTGTCGAAAGAAGCTCGCCTGCAGCAGCATCTAATGATGGAGACTTCAATTACAATTACAATTCCAACTCGAGCTCTATGACAACAGGTAAAAAGCAAAAGAATTACGCAGCGAATGGTACAGGATCCGTAGAGGAACTATGGCAAGCTTTTTTTGCTAATCCCGTTGATTGGTGGGATAATAGGAAGAATAAGAGAAGCCCAAATTATCCGGATTTCAAGCACAAAGACACGGGTGAAGCTCTATGGGTTGAAGGGAGGTTCAATCCATCTTGGGTTAAATCTCAGTTGTCGATATTAGATTCACGAATGGAATCTTTTCATGATCAAAATGCTAACACGCGCTCAAATTCCATGTTTGGAGACCACTTGACCCCCTATTAA | 972 | 42.49 | MAIMHQISLTNNLQFLPSKPILIKPTPPKNPIFTFPTSLNKKLNSRLLSVSANGSNRVTTSFDYNNNNNEQYEYEQGLNGRGGQQQQQQYPRPEEIEWKKELCNWVQLIGTVGTPVEFKQLGSGKVLAWCRLAVKKSATDTTWINLTFWDEVAHIASQHVEKGQQIYVTGRLVSDTVDSDDGKQQTYYKVVVQQLKFVERSSPAAASNDGDFNYNYNSNSSSMTTGKKQKNYAANGTGSVEELWQAFFANPVDWWDNRKNKRSPNYPDFKHKDTGEALWVEGRFNPSWVKSQLSILDSRMESFHDQNANTRSNSMFGDHLTPY | 323 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean1g00357 | 323 | CDD | SSB-OBF | 106 | 197 | IPR000424 | GO:0003697(InterPro) | |
| Hean1g00357 | 323 | PANTHER | SINGLE-STRANDED DNA-BINDING PROTEIN | 69 | 305 | IPR011344 | GO:0003697(PANTHER)|GO:0003697(InterPro)|GO:0006260(InterPro)|GO:0006264(PANTHER)|GO:0009295(PANTHER)|GO:0042645(PANTHER)|GO:0051096(PANTHER) | |
| Hean1g00357 | 323 | Pfam | Single-strand binding protein family | 104 | 197 | IPR000424 | GO:0003697(InterPro) | |
| Hean1g00357 | 323 | ProSiteProfiles | Single-strand binding (SSB) domain profile. | 102 | 199 | IPR000424 | GO:0003697(InterPro) | |
| Hean1g00357 | 323 | Gene3D | - | 102 | 236 | IPR012340 | - | |
| Hean1g00357 | 323 | NCBIfam | single-stranded DNA-binding protein | 103 | 235 | IPR011344 | GO:0003697(InterPro)|GO:0006260(InterPro) | |
| Hean1g00357 | 323 | SUPERFAMILY | Nucleic acid-binding proteins | 104 | 293 | IPR012340 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean1g00357 | K03111 | single-strand DNA-binding protein |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr1:10081764 | Hean2g00979 | Hean-Chr2:48349608 | dispersed |