AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hean1g00359 | ATGGAGATTTCGTCGTTCTACACCGCCTCAACCCGATGCTCGCTTCCTTCTTCATCAGATATGGTGCAGCTCAAGAAAGTTGGTGTCTCTCAATGTTATCAAAGCTCTGTATTTATGTTTTCTAATAAAAGCAGATCTCAGCGGTCACTTAATCAAAGTGTATTCTTGAAGCATAAGAAATACCCTGTTCAGGTGTTATGCAGCCAAAAGAAAGACATTCCTATATTAGAGGCTCGGTCTATGGACGAAATTTACGATATTTTGGCTGAGCGTCTGGTGCCAACTGCAGCTTCAGGAACAAATACGAGTTTAACGCATATTGTGGGCTTAGCGGGCCCTCCAGGAGCCGGAAAGACCACCGTTGCTCTAGAGGTTGCTAAGCGTGTAAACAAATTATGGCCTCAAAAAGCATCCGGATTCGATTCTCAAGTTGAACCCCCAGAAATCGCAGTAGTTCTTCCGATGGACGGTTTCCATCTCTACCGTCACCAGCTTGATTCAATGGAGGATCCGAAGGAAGCCTATGCAAGAAGGGGAGCTCCATGGACGTTCAGTCCTGAATTATTCTTGAAATGCTTGAAGACTCTGAGGGAGCAGGGGTCGGTATATGCCCCATCTTTTGACCATGCTGTAGGAGACCCGATTGAAGATGATATATTTATAAACATCCAGCACAAAGTGGTTATAGTGGAAGGAAATTATTTATTTCTGGATGAAGGTAGTTGGAAAGAAATATCATCAATGCTAGACGAAAAATGGTTTGTTGATGTTGACCTTGACGTAGCAATGGAACGGGTTTTGAAGAGACATGTAGAAACTGGTGTGGGTAGAACTCCAGAAATCGCCAAACAGCGGATTGAGTACAATGACAGACCAAATGCAGAACTTGTTTTGAAGTCCAAGAAAAATGCAGATTTGATAATCAAATCCGTTTCTCTTTGA | 942 | 42.99 | MEISSFYTASTRCSLPSSSDMVQLKKVGVSQCYQSSVFMFSNKSRSQRSLNQSVFLKHKKYPVQVLCSQKKDIPILEARSMDEIYDILAERLVPTAASGTNTSLTHIVGLAGPPGAGKTTVALEVAKRVNKLWPQKASGFDSQVEPPEIAVVLPMDGFHLYRHQLDSMEDPKEAYARRGAPWTFSPELFLKCLKTLREQGSVYAPSFDHAVGDPIEDDIFINIQHKVVIVEGNYLFLDEGSWKEISSMLDEKWFVDVDLDVAMERVLKRHVETGVGRTPEIAKQRIEYNDRPNAELVLKSKKNADLIIKSVSL | 313 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hean1g00359 | 313 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 105 | 309 | IPR027417 | - | |
| Hean1g00359 | 313 | PANTHER | URIDINE KINASE | 105 | 309 | - | GO:0005737(PANTHER) | |
| Hean1g00359 | 313 | Pfam | Phosphoribulokinase - Uridine kinase family | 107 | 312 | IPR006083 | GO:0005524(InterPro)|GO:0016301(InterPro) | |
| Hean1g00359 | 313 | Gene3D | - | 84 | 138 | IPR027417 | - | |
| Hean1g00359 | 313 | Gene3D | - | 139 | 312 | IPR027417 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hean1g00359 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Hean | Hean-Chr1:10103462 | Hean9g03074 | Hean-Chr9:148534992 | dispersed |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Hean17g01888 | . | 27 | 460 | PRT gene family | AT3G27440 | 75.346 | 0.0 | 679.0 | |
| Hean17g02011 | . | 2 | 183 | PRT gene family | AT4G22570 | 74.457 | 1.02e-96 | 276.0 | |
| Hean17g02510 | . | 81 | 566 | PRT gene family | AT2G16570 | 84.156 | 0.0 | 848.0 | |
| Hean17g04158 | . | 39 | 253 | PRT gene family | AT1G55810 | 22.936 | 1.59e-09 | 59.3 | |
| Hean16g00278 | WGDA | 1 | 190 | PRT gene family | AT5G11160 | 77.895 | 2.22e-103 | 294.0 | |
| Hean16g03288 | . | 61 | 130 | PRT gene family | AT1G27450 | 65.714 | 1.80e-24 | 90.1 | |
| Hean15g00700 | . | 186 | 289 | PRT gene family | AT2G16570 | 38.679 | 4.33e-08 | 53.9 | |
| Hean15g01366 | . | 46 | 224 | PRT gene family | AT1G55810 | 29.609 | 4.69e-17 | 82.4 | |
| Hean14g02941 | . | 5 | 483 | PRT gene family | AT5G40870 | 83.299 | 0.0 | 814.0 | |
| Hean13g01047 | . | 8 | 183 | PRT gene family | AT4G22570 | 78.212 | 1.75e-98 | 281.0 | |
| Hean13g02507 | ACH,WGDA | 1 | 469 | PRT gene family | AT4G26510 | 83.582 | 0.0 | 819.0 | |
| Hean13g02967 | WGDA | 31 | 208 | PRT gene family | AT3G27440 | 28.652 | 2.50e-16 | 78.6 | |
| Hean11g00029 | . | 2 | 187 | PRT gene family | AT1G71750 | 65.957 | 1.00e-88 | 256.0 | |
| Hean11g02950 | . | 95 | 258 | PRT gene family | AT4G38880 | 27.363 | 7.60e-07 | 50.4 | |
| Hean11g03787 | . | 81 | 533 | PRT gene family | AT2G16570 | 83.223 | 0.0 | 793.0 | |
| Hean10g00807 | . | 265 | 349 | PRT gene family | AT4G34740 | 68.235 | 2.33e-37 | 130.0 | |
| Hean10g00810 | . | 78 | 533 | PRT gene family | AT2G16570 | 80.044 | 0.0 | 774.0 | |
| Hean9g03587 | ACH | 22 | 239 | PRT gene family | AT1G27450 | 70.183 | 4.07e-103 | 297.0 | |
| Hean9g04508 | WGDA | 1 | 190 | PRT gene family | AT1G80050 | 79.474 | 1.10e-104 | 297.0 | |
| Hean8g00202 | . | 197 | 366 | PRT gene family | AT1G55810 | 85.38 | 1.15e-101 | 298.0 | |
| Hean8g00674 | . | 31 | 224 | PRT gene family | AT1G55810 | 30.412 | 9.89e-18 | 84.7 | |
| Hean8g02239 | . | 31 | 244 | PRT gene family | AT3G27440 | 26.724 | 2.42e-18 | 84.7 | |
| Hean7g02368 | . | 1 | 483 | PRT gene family | AT5G40870 | 81.988 | 0.0 | 815.0 | |
| Hean6g00076 | . | 197 | 371 | PRT gene family | AT1G55810 | 75.51 | 1.17e-96 | 288.0 | |
| Hean6g01804 | WGDA | 12 | 225 | PRT gene family | AT3G53900 | 78.037 | 4.02e-128 | 361.0 | |
| Hean5g03467 | ACH | 1 | 369 | PRT gene family | AT4G26510 | 79.675 | 0.0 | 610.0 | |
| Hean4g01073 | ACH | 53 | 241 | PRT gene family | AT1G27450 | 74.603 | 2.54e-101 | 290.0 | |
| Hean4g01475 | . | 45 | 224 | PRT gene family | AT1G55810 | 29.444 | 2.57e-17 | 83.2 | |
| Hean4g04146 | WGDA | 2 | 225 | PRT gene family | AT3G53900 | 71.429 | 3.28e-121 | 342.0 | |
| Hean3g02639 | ACH,WGDA | 1 | 469 | PRT gene family | AT4G26510 | 82.729 | 0.0 | 815.0 | |
| Hean3g03186 | WGDA | 31 | 244 | PRT gene family | AT3G27440 | 26.168 | 1.98e-16 | 79.0 | |
| Hean2g02219 | . | 2 | 183 | PRT gene family | AT4G22570 | 76.63 | 7.51e-100 | 284.0 | |
| Hean2g02220 | . | 2 | 181 | PRT gene family | AT4G22570 | 73.077 | 7.22e-95 | 271.0 | |
| Hean1g00359 | . | 31 | 208 | PRT gene family | AT3G27440 | 26.733 | 3.08e-09 | 55.8 |