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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00363 ATGGCGAATTACGCCGCGGTATTAGCCCTCTTTTGCACCATTCTATCCATCGTTGGTCCGGCCACTTGTCGCGCCACAACCGCCACCTCACCCAACAACTCATCCCCCCCTTCCGCCCCCTTAACCGCCTCCGAATCATTTGTGATTAAAGGCAAAGTTTATTGCGATCCGTGTCGAATCCAATTCCCTACCAAAATCAGCTACCCCGTCCCCAACACAAAAGTTGTCCTGCGTTGCCGTCAACGCGAATCAGGAACTGAAACGACGAAGGTCGAGGGAAAGAGTGACGCTAAAGGCATGTATAGCATCACTGCGACGGGTGATCATGAGGAGGAGATTTGTGATGTGAGGATTACTGAGAGTCCTGATAGTAAGTGTCCTGAGGTTATGGATGATGAGAGCATTGCTCGGGTCTCGTTGACCGATAAAAATGGCGTTCGGGGGAAGACTCGAGTGGTGAATCCGATTGGGTTTATGGTTAAAGAGATTGATCCGCGCTGCAAAGAGATTCTTGCGGAGATTGGTATTATGGGTATTTAA 540 49.81 MANYAAVLALFCTILSIVGPATCRATTATSPNNSSPPSAPLTASESFVIKGKVYCDPCRIQFPTKISYPVPNTKVVLRCRQRESGTETTKVEGKSDAKGMYSITATGDHEEEICDVRITESPDSKCPEVMDDESIARVSLTDKNGVRGKTRVVNPIGFMVKEIDPRCKEILAEIGIMGI 179
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00363 179 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 11 175 IPR006041 -
Hean1g00363 179 Pfam Pollen protein Ole e 1 like 49 132 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00363 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
103081 Hean1g00363 Hean4g02775
402256 Hean11g02471 Hean1g00363
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:10368984 Hean11g02471 Hean-Chr11:107797198 wgd
Hean Hean-Chr1:10368984 Hean4g02775 Hean-Chr4:154840375 wgd