AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00370 ATGGCTGCGGCGAATAAATTTATGCATCATTTATCAATGGCCGCTTGCGAGTGGTTCTTGATATTCTTAATGTATATGGATGCTGCATTAGGGCTTATTTTGACCAAATTCGCGCGTCAATGCGAATTACAACCACCTTGCTTGTTTTGCTTCCGGTTCGATCATGTTTTCGGAGAGAAACCGGATGCGTATTTGAGCCACTTTTGTAATAAACACCGAGGTGAAGTTACGTGTCTGGTCTCGTGTGATCTTCATCGTAAGCTTTCGGACGTACGAGAAATGTGCGATGATTGTTTCACGTCAATAACGAAGCAAAAACCGGGGTATTTGAAACCGCTGTTGAATAAGAATTTCGTTCGTGCGCCTTCGAGTACGGGGTCATGTTCGTGTTGTGAACGACAGTGGAAACCGAAACCAAGAAGTCAGATGAAGTTAGGGGTTCCGAAAGTTACCATGCACCCTCCGTTACCGCTAACCAAGGGTCGGGGTCGGGGTCGGCCCGGTGGCCGGTTTCGTCGGCGGAATTATTTTAGTAAGGCCCGCGATAAGATTTCCGGAACCGTGACTCCTTGCTTTGTTGATACTAATATCCGCGCGGGCGCTGACATGGACGCGTTGTCCGATTCGGGCTGTGCGGATCTTAAGTTCAATTCGTGTTCGGGTTCCGAATCCGGAGATTCGTTTTACGAGATTGAATGTGAAAACGAGAATGATTCTCGTATTGTTATACATCAACGTTCCAATAGTGTTCCTATTCTCGAGCCTTCCCTACTGAACGGAATCCATAACAAGAGTTTAGTGAGTCCTCTATCTTCGACATCCACTATTCTTGAGCCTCCACTACTGAACGGAACCCGTAACGAGAGTATCGCGAGTCCTCTATCTTCGATATCCACTATTGGTGAGCCTCCACTACTGAACGGAATCCGTAACGAGAGTATCGTGAGTCCTCTGTCTTCGACATCCAGCGATTCAACTTCAACCGTGCATGATGTGAAAGAAAACGGGTCTCCAGAAGTTGGTAACGAAACTAGTTCGTTAAATCAAGATTTGCATTCTTTTAACGGTGACGAGGTGTCACCTTGTTCGGATAAACACGAAGGTTTCGAATCTCCGGGCGCGCACAGTGCGCAGAGTGTAGGTGAAATCAACGGTGATTGCGACATCGAAAAGCTAAAACGACAAATGGAACATGATCAAGAACAATTGCGTTTATTACACAAGGAACTAGACGAAGAACGAAACGCTGCCGCAATAGCTGCTGACGAGGCGATGGCGATGATTACACGATTGCAAGAAGAAAAATCCGCGTTACATACCGAAGCGTTGCAGTACTTAAGAATGATGGACGAACAAGCGGAATACGATATGGAAGCGTTAGATAAAGCTAACGATCTTGTTACCGAGAAAGAGAAAGAGATTCAAGATCTAGAAGCCGAGCTGGAATATTTCAGAAGCCGATACGACGACGAAATGATCACGGGGGACACTCCGGTTAATTTCAAAGAAAATCATACGGAAAATGGGAAAATCGAATCTTTATCTATATCTTCTTCCTGTTTAAAATCTACGAATACGTTCGAACCGAGGGTCAATAATCTTCCGGTTTTAGATCTTGAAGATGAAAAGAAACACGTTTTACAGTCTTTATCCGAGTCGGAGAGGAAATATCACCAATTGTCTAATGGTGGCGATAAACCGTCGCAACAAAATGAGATCGATATGCGCACACTTGAGAATGAAATATCGGATCTTAGTGAATGGTTAGAAGCGCTCGAATCTGATCGGGATTTTCTTGAGCATGCTTCTAACACGGTCCAGAGTCACGTGGGATTGGAATTTATTCAAGAAATAGCTCAACACTTGCATGATATGAGGCGGATTCGGTTTGATAGACGATGCCAAACTGTTGATTGA 1917 44.71 MAAANKFMHHLSMAACEWFLIFLMYMDAALGLILTKFARQCELQPPCLFCFRFDHVFGEKPDAYLSHFCNKHRGEVTCLVSCDLHRKLSDVREMCDDCFTSITKQKPGYLKPLLNKNFVRAPSSTGSCSCCERQWKPKPRSQMKLGVPKVTMHPPLPLTKGRGRGRPGGRFRRRNYFSKARDKISGTVTPCFVDTNIRAGADMDALSDSGCADLKFNSCSGSESGDSFYEIECENENDSRIVIHQRSNSVPILEPSLLNGIHNKSLVSPLSSTSTILEPPLLNGTRNESIASPLSSISTIGEPPLLNGIRNESIVSPLSSTSSDSTSTVHDVKENGSPEVGNETSSLNQDLHSFNGDEVSPCSDKHEGFESPGAHSAQSVGEINGDCDIEKLKRQMEHDQEQLRLLHKELDEERNAAAIAADEAMAMITRLQEEKSALHTEALQYLRMMDEQAEYDMEALDKANDLVTEKEKEIQDLEAELEYFRSRYDDEMITGDTPVNFKENHTENGKIESLSISSSCLKSTNTFEPRVNNLPVLDLEDEKKHVLQSLSESERKYHQLSNGGDKPSQQNEIDMRTLENEISDLSEWLEALESDRDFLEHASNTVQSHVGLEFIQEIAQHLHDMRRIRFDRRCQTVD 638
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00370 638 Coils Coil 575 595 - -
Hean1g00370 638 MobiDBLite consensus disorder prediction 358 382 - -
Hean1g00370 638 ProSiteProfiles GTD-binding domain profile. 387 485 IPR007656 -
Hean1g00370 638 Coils Coil 389 416 - -
Hean1g00370 638 PANTHER MYOSIN-BINDING PROTEIN 2 318 633 IPR039306 GO:0017022(InterPro)
Hean1g00370 638 MobiDBLite consensus disorder prediction 317 345 - -
Hean1g00370 638 Coils Coil 421 441 - -
Hean1g00370 638 MobiDBLite consensus disorder prediction 553 572 - -
Hean1g00370 638 Pfam Zein-binding 391 481 IPR007656 -
Hean1g00370 638 Coils Coil 536 556 - -
Hean1g00370 638 Coils Coil 460 487 - -
Hean1g00370 638 MobiDBLite consensus disorder prediction 148 171 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00370 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr14:123159960 Hean1g00370 Hean-Chr1:10708464 dispersed
Hean Hean-Chr15:6689686 Hean1g00370 Hean-Chr1:10708464 dispersed
Hean Hean-Chr1:10708464 Hean4g03126 Hean-Chr4:169186162 dispersed
Hean Hean-Chr1:10708464 Hean6g00536 Hean-Chr6:9660684 transposed