AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00373 ATGGGTGCTCTTAAAGATTTAGCAAAGTCATTCTCTCGAATGACACAAGAGGAAGTAGACTTGTTTTGTTTGGAGTATGGTATTGATAAAAAATTTAACCCAACTGCCCCTGCTTGCGATGTTCCTGTTGACAAACCAAACCCTGGTTCGATTGCCTTGTATTGTCGTCATTTTCAGTGGTCTAATCTTCGTTACCCTTTTTCGTTTTTCGTTTTGAACTTGCTTGAGTATTATCGCGTTTCTTTTGGGCAAGTTCATCCGAAGGGGATGGCTAGGGTTTTGCACTTTGAAATGTTGTGTCGTGCTCTTGGGTATGATCCCTCTTTGTTGCTCTTTCGGAGGTTTTTTCGTTTAGCCAAAAATGGTGACTGGTTCACCTTTGAGACATCAAAGGTTGATACTTGTCTTATTTCGTCCATGGTTACAACGCTTGGGTCCTGGAAGGATCGCTTTTTCTGGGTTTCTGAATCTATCGTTCCTTTCAAAATGGTGTGGAGGCATCCGGATGCTGTTCTTAATGATCCGGAGCCTTCTGAATCTGAGTTGAACGATGCTTTTCTTTCAGCTATTCGGGGGTGCCCTTCGAGGGTTCGTTCCTTTCCCGAACATTTGTTAGTGCTTTTAGGGGTTAGTAATATTTGGGGAAAAGCCGATCGGGATCCGGTGTTAATGAGAAATGGCATTGTTATGTCTGCTTTGGACTTTATCAAGAGTGACGACACGTCCGATGTTGTGTTTGAGGATGCCCCGTCTGTTCCGGGTGAGAATGTTGTGGTTAGGACTTCCGAGCAAAGGTTTGAGGGCACGGGTTATGCTAGTGTTGCCAACGTTAAGGGTTTTACCAAGTCTAATGCTCCCAAGTCTTCAACTCGCCGATCTTCTCGTCGTTTGTTGAAAGCTGGTCCTCAATCCACTTCTACTGAGCCAGTGGATTTGACTGATGATATTGAAGTTTCGGAGGATCAAGTTGAAGCGGGTGTTGAGAAGGACAAGGAGTTGGTTGTTCATGGTAAGAAGGTTCGAGGCAAGAAGGTTGTCCATGTTCAGGAATCTTCAAGCAGGGACGTTGAAGGGTTGGACCCTGAAGGTACTTATGTGCCTGCTTGGCTAGTGAAGAATGATGACACCTTCAAGGATGCTGCTGTTTGCGAGGATGCTCTTAGTCATCTTGCTCCTCCTTCTGTGCACAAAACCATTGCTGAGATGGATGATGACTTCATGTTGTCTCGCATGGTTTTAACCACCTGTAACCTTGCTGCTATGCTTCCTCAAGGGATTACTCGCTTTCGCCAAAGGATGCAGGAATATGAGGACTTCTCCAAGAAGAAGGATAAGATGAAATCCTCCCTAGCATCAATGAAGAAGGAAATAGCTGGGTTTGCAGAGAAGGAAGCAGCGTGGCAGAAGGAGCAACAAGCTTTTCGTGAAGAAAAAGAAGGGTTGAAAGCTTCGGTTGGCCAAGTTACTGCGGACAATCAGTGGTTGATTGAGCATGGTTTCCAGCAGGTTGTCACTTACCTTTTACATTCCAAGGAGTTTAACTCTGCCCTTGGTGATGTTTACACTAAGCTTTTGAACCTGGGGAAACATCAAGGCCTTACCGCTGGTTACAAGCTTCATGAGTCTGGACAACCCTTGGAGAAATCACCTATGTTTCGCCCCGAGGCTTCTGATATCTTCAAAGCTTCTGTTGAGCAGATGGAGAGGCTAACCTACCCTTACATTCATGAAGTATCTTCTTGCTTTGGTAAGCCTTTATCTGTTTTACAGGAATTGAAGCCTGAGGGGTTGAATGAGAAATTTTGTGCTGAGGTTTTGGGTTCCCTGTCAAGAAAGAGGTCTTACTCTGGGGATAGTGATGATACCCTCTCAAGTTTGCCTGATGCTTCAAAAGATGCTGGTTTGGAGACCTCTGCGGTTGGTGGTGATGAGGGTGCTAAGGCGAAGAAGACTAAGAAAGCCAAGAAGTCTAAGGTTGAAGGTTCCAAGCCTTCTGCTACCTGA 2004 45.21 MGALKDLAKSFSRMTQEEVDLFCLEYGIDKKFNPTAPACDVPVDKPNPGSIALYCRHFQWSNLRYPFSFFVLNLLEYYRVSFGQVHPKGMARVLHFEMLCRALGYDPSLLLFRRFFRLAKNGDWFTFETSKVDTCLISSMVTTLGSWKDRFFWVSESIVPFKMVWRHPDAVLNDPEPSESELNDAFLSAIRGCPSRVRSFPEHLLVLLGVSNIWGKADRDPVLMRNGIVMSALDFIKSDDTSDVVFEDAPSVPGENVVVRTSEQRFEGTGYASVANVKGFTKSNAPKSSTRRSSRRLLKAGPQSTSTEPVDLTDDIEVSEDQVEAGVEKDKELVVHGKKVRGKKVVHVQESSSRDVEGLDPEGTYVPAWLVKNDDTFKDAAVCEDALSHLAPPSVHKTIAEMDDDFMLSRMVLTTCNLAAMLPQGITRFRQRMQEYEDFSKKKDKMKSSLASMKKEIAGFAEKEAAWQKEQQAFREEKEGLKASVGQVTADNQWLIEHGFQQVVTYLLHSKEFNSALGDVYTKLLNLGKHQGLTAGYKLHESGQPLEKSPMFRPEASDIFKASVEQMERLTYPYIHEVSSCFGKPLSVLQELKPEGLNEKFCAEVLGSLSRKRSYSGDSDDTLSSLPDASKDAGLETSAVGGDEGAKAKKTKKAKKSKVEGSKPSAT 667
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00373 667 Coils Coil 436 456 - -
Hean1g00373 667 Pfam Putative gypsy type transposon 58 118 IPR007321 -
Hean1g00373 667 MobiDBLite consensus disorder prediction 612 667 - -
Hean1g00373 667 MobiDBLite consensus disorder prediction 282 310 - -
Hean1g00373 667 PANTHER OS06G0165300 PROTEIN 6 506 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00373 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:10785564 Hean1g03063 Hean-Chr1:134129917 dispersed
Hean Hean-Chr1:10785564 Hean7g01955 Hean-Chr7:119265235 transposed