AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00399 ATGAATCCGAATTGGTGGAATCCGGCCCCCGACAGCGGTAAATATACAAGTTCTGGTGTCACTCCCTCATGGTGGGGTACACCGGCGCCAGACAGTGGAAAATACACGTCTACAAGTCTATCGCCTTCATGGGCCGAGTCTCCGGTATCGACATCTTCTCAGGGAAATCAATGGGCATTGGTATCGAATCAAACTCCAAGTATCCAAAGTATCTTACTGAGCGAAAGCGAAACAGGAAGTTTGAATCGACCTCCAAAGCTGATGCATTTAAACGAGTATCCGGGTTGGGCTGATCGTTTCCGTACATATGTTCTTGGTCAAAATACACAGCTGTGGATACGCTTCACCACAGACTTTGATCAAGCTATCGAAGTCGCCGCTTCAACAACTGCTAGTTTTGCCGATCTTCCAGACGATCAAAAGAAAATATATGATCTGGAGAAGAAAGCCTACGCCATTCTCACTCAGGCGTTAAGCAAAGACATCTATCATCAGTTTGTCAGCTTCAAGACTACAAAGAAGTTGTGGGACGGTTTGAAAACCAGGGGAGTAGGGAATGAAGCAACACGTCAATTGCGTCATGATCTGCTCAAGAAAGAATTCGACTGTTTCACATGCTTAGATAAGGAGTCTTTGGGAGACATGACAAGTCGGTTTTATCATTTGCTTACTGAGCTGAATAATTTTGGTGTGACGACAACTCAAGCAGAAGTGGTGAAAAAGTTTGCTGATGCTTTGCCTCCCCAATGGAGTAGTTTCTTGGAAATCCTGAAGTATAACGGAGTGTTGAAAACTACAAATATCAACGATTTCGTGCAGCTTTTGGAAAACAAGGATCAGGAGGAAACATTAAAGGCGAAGAGAGTTCCATTGCCACAAAATCCAGAAATGTATTGTGGAACTTCCAATACTTCGTCTACAAGAACAGGTCCACATGCTCCTCTGCAAACGGCTTTTGTCACAAGTACAGATATGTATGGAAATCCGGTGCAAGTTCCTGTTAAGCCACCTCCTACCACAGACATGTATGGAAATCCAATACAACCACCTCCTCCTCCTCCTCCTGCTCAAACACAACGTGCATGTTATGGAGGAACATCATCTGCAGGTCAACAATCAAAGCCAAGTACTGTACAGCTAGACACTTCAAGCTTTTCTAAAGTCAGTGTAGAAGTAGCTAAGGAACACATGGAGCTACTTAACACTGTAGTGAGCGCGTACTGTGGGTTGATAGAAGGTCAGATTGGCAATATTAATCTGACACAAAAAGACTACAGGTAG 1281 44.03 MNPNWWNPAPDSGKYTSSGVTPSWWGTPAPDSGKYTSTSLSPSWAESPVSTSSQGNQWALVSNQTPSIQSILLSESETGSLNRPPKLMHLNEYPGWADRFRTYVLGQNTQLWIRFTTDFDQAIEVAASTTASFADLPDDQKKIYDLEKKAYAILTQALSKDIYHQFVSFKTTKKLWDGLKTRGVGNEATRQLRHDLLKKEFDCFTCLDKESLGDMTSRFYHLLTELNNFGVTTTQAEVVKKFADALPPQWSSFLEILKYNGVLKTTNINDFVQLLENKDQEETLKAKRVPLPQNPEMYCGTSNTSSTRTGPHAPLQTAFVTSTDMYGNPVQVPVKPPPTTDMYGNPIQPPPPPPPAQTQRACYGGTSSAGQQSKPSTVQLDTSSFSKVSVEVAKEHMELLNTVVSAYCGLIEGQIGNINLTQKDYR 426
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00399 426 MobiDBLite consensus disorder prediction 336 380 - -
Hean1g00399 426 MobiDBLite consensus disorder prediction 296 313 - -
Hean1g00399 426 MobiDBLite consensus disorder prediction 336 358 - -
Hean1g00399 426 Pfam gag-polypeptide of LTR copia-type 147 262 - -
Hean1g00399 426 MobiDBLite consensus disorder prediction 1 48 - -
Hean1g00399 426 MobiDBLite consensus disorder prediction 360 380 - -
Hean1g00399 426 PANTHER DUF4219 DOMAIN-CONTAINING PROTEIN-RELATED 102 288 - -
Hean1g00399 426 MobiDBLite consensus disorder prediction 292 313 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00399 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:11344626 Hean3g03153 Hean-Chr3:152377234 dispersed
Hean Hean-Chr1:11344626 Hean7g00145 Hean-Chr7:4267580 transposed